ggKbase home page

SCN_reactora_scaffold_19526_26

Organism: SCN_bioreactor_inoc_reactora_Bacteroidetes_38_10

near complete RP 41 / 55 BSCG 51 / 51 ASCG 10 / 38
Location: 23377..24807

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZU98_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 474.0
  • Bit_score: 657
  • Evalue 7.00e-186
RND efflux system {ECO:0000313|EMBL:GAE85383.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 475.0
  • Bit_score: 703
  • Evalue 1.60e-199
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 472.0
  • Bit_score: 436
  • Evalue 9.30e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroides reticulotermitis → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1431
ATGAATATGAAAATTAGAAATATAAAAGGAGTCGTTTTATCAGGGTTAATTGCCCTGATAGGACTTCCATCCTGCCAAGTTATGAATAAATATAAATCACCTGAAATAGATAGTGCCGGATTGTATGGAAACATCAGTTCTTCAGATACAACAACCATAGCTTCTATTCCGTGGAGAAAATATTTTACAGATCCTTATCTACAATCTTATATTGATGAAGGGTTAAATAATAATTTCGATATGTTTATAGTAGCAGAGCGAATAAAACAGGCTGAAGCCGTTTTAGGTATGGCGCGCGCTGCTTATTTTCCCGAAGTCGCACTAACTGCTCAGGCAGACCAGACCCGATTGAGTAATGCTGATCCATTGACAGGAATGCCTAAAGGCCGGAATAGTCTGGCATATCATAAAGAAAACTATACATTGGGCATTGTAGCTACTTGGGAATTAGATGTGTGGGGAAAGATGAATCGACAGTCAAGAGCTAAATATGCAGATATGTTGAACAGCTATGCAGGACGTAATCTAATTCAAACATCTCTTATTGCAAATATTGCAAATACATATTATTCATTATTGGCGTTAGACCAACAATTAGCCTATACGAATGATATGATTATGCTCATGGAAGAAAATCTTAAGACAATGGAAGCTATGAAGGAGGCTGGGCTAACTAATGGTGCGGCGGTAGAACAAACGAGAGCCGCATTGCATAGTGTAAAAACTTCTGTACCCGATTTAGAGAGTAATATAGTACAATTGGAGAACGCAATGTGTGGAATGCTGGGACGAAAGCCTTATGCAATTTCACGTGCTATGTTAGAAAATCAGATCGTTCGTCAAAATTTATCTTATGGAATTCCAGTACAAATGTTGTCTCGTCGGCCGGATGTACAACAAGCCGAGTTGTCGTTCCGTTCGGCTTTCGAACTGACAAATGCGGCACAAGCTAGTTTTTATCCATCCATCACATTAAGTTCCGGTATAATTGGTTATTCGACAATTAATGGATTAAGTAACTTCTTTAAACCAGAAAATTTGTTTGCTAACATAGCTGGCGGTCTAACCCAACCTATTTTTGCTCGTAAAAAATTAATAACTCAATACAAGGTTGCAAAATATGAACAACAGGCTACCTTATTAACCTTTGAGAAAACAGTGCTATCTGCCGGGCAAGAGGTTTCCGACATAATAACTATATATGAAAGTTCTCTAAGAAAGGATAAAGATAGATCTATTCAAATTGAGTCACTAACTAAATCTGTAGATTTTACGCAAAAGCTATTAAAAGCTGGAGAAGCCACTTACCTTGAAGTGCTAAGTGCTCAACAAGGATTGCTAGAGGCTCAACTCAATCAAGTAAGTGACAAATTGCAACAATTGCAAGCTACATCCAACTTGTATAGAGCCTTAGGTGGCGGTATTGAGTAA
PROTEIN sequence
Length: 477
MNMKIRNIKGVVLSGLIALIGLPSCQVMNKYKSPEIDSAGLYGNISSSDTTTIASIPWRKYFTDPYLQSYIDEGLNNNFDMFIVAERIKQAEAVLGMARAAYFPEVALTAQADQTRLSNADPLTGMPKGRNSLAYHKENYTLGIVATWELDVWGKMNRQSRAKYADMLNSYAGRNLIQTSLIANIANTYYSLLALDQQLAYTNDMIMLMEENLKTMEAMKEAGLTNGAAVEQTRAALHSVKTSVPDLESNIVQLENAMCGMLGRKPYAISRAMLENQIVRQNLSYGIPVQMLSRRPDVQQAELSFRSAFELTNAAQASFYPSITLSSGIIGYSTINGLSNFFKPENLFANIAGGLTQPIFARKKLITQYKVAKYEQQATLLTFEKTVLSAGQEVSDIITIYESSLRKDKDRSIQIESLTKSVDFTQKLLKAGEATYLEVLSAQQGLLEAQLNQVSDKLQQLQATSNLYRALGGGIE*