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scn_reactorb_scaffold_4422_29

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 26629..27030

Top 3 Functional Annotations

Value Algorithm Source
tRNA(fMet)-specific endonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 132.0
  • Bit_score: 153
  • Evalue 1.30e-34
tRNA(fMet)-specific endonuclease VapC n=14 Tax=Escherichia coli RepID=M8KSE4_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 132.0
  • Bit_score: 152
  • Evalue 1.60e-34
Virulence-associated protein c similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 132.0
  • Bit_score: 153
  • Evalue 2.60e-35

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
GTGACGCGCTACCTGCTGGACACCAACATCTGCATCTACGTCATCAACGACCGGCCTGCGCACGTGCTGCCCGTTTTCAACGCGCACCATGGCCGCATGTGCATCTCAGAGGTCACGCGGTTCGAATTGCTCAGCGGCGCCTACAAGTCGCAGGCGCCGCACAAGGCCCTGCAGCGCATCGGCACTTTTTGCGCCATGCTCGACGTGCTGCCTCTGGACACGGCCGCCGCCGTGCATGCGGCCCAGATCCGCGCGATGCTGGAGCAGAAAGGGCAAAAGATAGGCCCCTACGACACGCTGATCGCGGGCCATGCGCGCAGCCTCGCGGCGATCCTCGTGACGAACAACACCCAGGAATTCCAGCGTGTCGGCGGATTGATGCTGGAGGATTGGAGCCAGTAA
PROTEIN sequence
Length: 134
VTRYLLDTNICIYVINDRPAHVLPVFNAHHGRMCISEVTRFELLSGAYKSQAPHKALQRIGTFCAMLDVLPLDTAAAVHAAQIRAMLEQKGQKIGPYDTLIAGHARSLAAILVTNNTQEFQRVGGLMLEDWSQ*