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scn_reactorb_scaffold_5580_24

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(31421..33649)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI00030EA0DB similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 751.0
  • Bit_score: 601
  • Evalue 9.20e-169
TonB-dependent receptor {ECO:0000313|EMBL:KJJ98391.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 751.0
  • Bit_score: 602
  • Evalue 5.80e-169
putative tonB-dependent receptor protein similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 745.0
  • Bit_score: 533
  • Evalue 8.70e-149

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Taxonomy

Pseudomonas sp. 21 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2229
ATGCAGTTCGACATTCCGAGACGCGCGGCCGACGTCCGCTTTGCCCGTACCCTGGCCGCGATGGGCGTGGCCCAGGCGCTTGCCGCCTGCGCCGGCGCGGCCTGGGCGCAACCGGCGCAGGGGCAGGGCGCCAGCACCGTGCTGGACCGGGTGGTGGTGACGGCCGACCGCCGCGAGGAGGACGTGCAGGAGGTCAACACCGCCATCACCGTGATCGGCGGCGACGCGGTGGAACAGAAGGAGGTGCGCAACGCGGGCGACGTGATCCGCTTCGTGCCCAACATGACGGCCGACACCACCGACGGCCACGGCCGCCCCAAGTGGTACATCCGCGGCATCGGCCTGTCGGATGCCTCGCTGCACATGACCAACCCCGTGGGCACCTACGTGGACGACGTCTACGTCTGGAACGCCAGCACCGTGGGCTTTCCGCTGTTCGACCTGGAGCGCGTGGAAGTGCTGCGCGGCCCGCAGGGCACGCTGTGGGGCAAGAACACCACCGGCGGCGCGATCAACTTCATCTCCAAGAAGCCCGTGTTCAAGAACGAGGGCTATGTGAAGGCGTCGTACGCGCGCTTTAACGAGAGCCTGCTCGAAGGCGCCTACAACGCCGTCATCAAGGAGGACGTGCTGGCCGCGCGCATCTCCTTCCACCGCCAGGACGCCGACCGCTATACGCAGAACAGCTTCTACCCGGGCAGCACCGACCGCTACAGCGAGACGGCGCTGCGCGGCCAGCTGCAGGCCAATTTCTCCGACAGTTTCGACGGCCTGCTGAACGTGCACTACCGCAAGTTCAAGGGGCCGGTGCTGACCAGCGGCTCGCGCGCCAACCCGTCCAACACGCGCTGGGATGCGCCCTCGCTGGCGCAGGCCACCGACGACCTGGAGCAGATCGGCGGCGCCCTCACGCTGAACAAGCAGTGGGGGCGCAACACGCTGACCTCCATAACCGGCATCGAGCACTTCGACCGCGCGGCCACCGGCGGCGACCGCGTGCCGTACGAGTCGTCGCGTAGCTGGTCGGACTTCAGCGTCAAGCAGTTCAGCCAGGAGCTGCGCCTGGCCTCGCCGAAGGAAGACCGGCTGTCGTGGATCGTGGGCGGCTACTACTTCAAGGGCAAGCTCGACTCGGCTTCCGCCAGCGCCGTCCTCCCCGGCTCGGTCAGCGCCAGCGGCGCGGCCAAGGCGCTGGCCTACAACCGGGGCGACTACACGCTCGACGCGGACAGCTACGCGCTGTTCGGCAGCGTGAACTACAAGGTCAACGACCGCTTCGACGTGACCACCGGCGTGCGCCAGACGCGCGAGACGAAGGACATCGACCTGTTCTACGGCAGCGCCCCGGCGGGCTTCGGCTTCAACGACCCGTCGGCGGGCGGCTGGTACGGCGGCGGCGTCAACCGCCCGCTGACGCGGCGCGCCTACCAGAACGAGAGCCGGGCGTGGAACGACTTCACCTGGGACGTCACCCCGTCCTACCAGGTGAACGACAACCTGCGCGCCTACTTCCGCTTCGCCAAGGGCTTCAACGGCGGCAACTTCAACGCCGGCGCCACGGCGCAGACGGAGGTGGGAGCCATCAATCCGGAGTACCTGCGCTCGTACGAGCTGGGGGCCAAGAGCAACTGGCTGGACAACCGGCTGCAGGTCAACGCATCGGTCTTCTACTACGACTACACCGACCTGCAGCAGAAGGCCGAGAAGGTCGATCCGGCCACCAACCAGATCATCAAGACCTTTCTCAACGCCGGCTCCGGCGTGGTCAAGGGGGCCGAGCTGGAAGTGCTCGCGCGGCCCGCGCGCAACCTCACGCTGGGCATCAACCTGGGCTACCAGCACACCGAGTTCACGGACTTCCAGGTCACGGCCGCGAAGAACATCGCCGGCAACTGGTTCAACCGCGTGCCGCGCGTGGTCAGCAACGTGTTCGCCGACTACCGCATTGCGCTGGCCAGCGGCGCGGCGGTGAACCTCTCGACCGACTGGTCGTACCGCAGCAAGTCTTTCTTCAACGCGGAAGACCAGACCACGCCCGATCTGATCGAACCGGCCTATGCCCTGGGCAACGTCTCCGTCGGCTACACGACGGCCGACGGCAAGTACCACATCCGGGGCTATGTGCTCAACGTCACCGACAAGGTGTACCGCAACACCTCGCTCATCAGCGGCAGCTATTCCTACGGCCCGCCGCGCGTGTTCGGCGTCTCCGTCACCGCTAAGTTCTGA
PROTEIN sequence
Length: 743
MQFDIPRRAADVRFARTLAAMGVAQALAACAGAAWAQPAQGQGASTVLDRVVVTADRREEDVQEVNTAITVIGGDAVEQKEVRNAGDVIRFVPNMTADTTDGHGRPKWYIRGIGLSDASLHMTNPVGTYVDDVYVWNASTVGFPLFDLERVEVLRGPQGTLWGKNTTGGAINFISKKPVFKNEGYVKASYARFNESLLEGAYNAVIKEDVLAARISFHRQDADRYTQNSFYPGSTDRYSETALRGQLQANFSDSFDGLLNVHYRKFKGPVLTSGSRANPSNTRWDAPSLAQATDDLEQIGGALTLNKQWGRNTLTSITGIEHFDRAATGGDRVPYESSRSWSDFSVKQFSQELRLASPKEDRLSWIVGGYYFKGKLDSASASAVLPGSVSASGAAKALAYNRGDYTLDADSYALFGSVNYKVNDRFDVTTGVRQTRETKDIDLFYGSAPAGFGFNDPSAGGWYGGGVNRPLTRRAYQNESRAWNDFTWDVTPSYQVNDNLRAYFRFAKGFNGGNFNAGATAQTEVGAINPEYLRSYELGAKSNWLDNRLQVNASVFYYDYTDLQQKAEKVDPATNQIIKTFLNAGSGVVKGAELEVLARPARNLTLGINLGYQHTEFTDFQVTAAKNIAGNWFNRVPRVVSNVFADYRIALASGAAVNLSTDWSYRSKSFFNAEDQTTPDLIEPAYALGNVSVGYTTADGKYHIRGYVLNVTDKVYRNTSLISGSYSYGPPRVFGVSVTAKF*