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scn_reactorb_scaffold_19069_22

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 23967..24170

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 67.0
  • Bit_score: 129
  • Evalue 2.00e-28
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 67.0
  • Bit_score: 129
  • Evalue 1.00e-27
DNA-directed RNA polymerase subunit omega n=4 Tax=Comamonadaceae RepID=RPOZ_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 67.0
  • Bit_score: 129
  • Evalue 7.10e-28

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCACGCATCACCGTTGAAGACTGCCTGCAGCAGATCCCCAACCGCTTCCAGCTCGTGTTGGCTGCCACGTACCGTGCGCGCATGCTCAGCCAAGGCCACGCCCCCAAGATCGAAAGCCGCAACAAGCCCGCCGTGACCGCCCTGCGCGAGATTGCCCAAGGCAAGGTCGGCCTGGAGATGCTCAAGAAGGTTCCCGGCTGA
PROTEIN sequence
Length: 68
MARITVEDCLQQIPNRFQLVLAATYRARMLSQGHAPKIESRNKPAVTALREIAQGKVGLEMLKKVPG*