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scn_reactorb_scaffold_32272_30

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 35097..37103

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 factor interaction domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TW44_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 661.0
  • Bit_score: 949
  • Evalue 9.50e-274
GAF modulated sigma54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 661.0
  • Bit_score: 949
  • Evalue 2.70e-274
GAF modulated sigma54 specific transcriptional regulator {ECO:0000313|EMBL:GAO25414.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 649.0
  • Bit_score: 949
  • Evalue 1.30e-273

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2007
ATGGGCACCATGCCGACCCGGCCATCCGACATGGCCGTGCAGACACCGCCGCCGCCACCGGACGCCATCGCCGTCATCGACGAGGCAAACCAGCGCTCGCTCGCGTTTGGCGTCTCCACCGATGACGAGCCCGACTTCACCAGCCTCGGCATCGGCCACCTGAAGGACTCCCTGGAGGAGAACCGTTTCCTGTTCCAGCATGCCGTGCCGGTGATGGAAACGCTGCGCGGGCAAATCGCCAACACCCACAGCATGGTGCTGCTGACCTCGGCCCAGGGCATGGTGCTGCACTCCATGGGCGACAGCGATTTCCTGGAAAAGGCCAGCGAGGTGGCGCTGGTGCCCGGCATGGACTGGAGCGAGAAGACCAAGGGCACGAACGCCATCGGCACGGCCCTCACGGCGCAACAGGCCATCACCGTGCATGGCGACCAGCATTTCATGCGCACCAACCATGCGCTGACCTGCTCGTGCGCGCCCATCCTCGACCCCTACGGGGAGATCGTCGGCGCGCTGGACGTGACGGGCGACCACCGCAGCTACCACCAGCACACGCTGGCGCTGGTGCGCATGTCGGCGCAGATGATCGAGAACCACATGTTCGCGAGCAGCTTCCCGAAAGCGGTGCGCCTGCATTTCCACGCGCGCCCCGAATTCCTGGGCACGCTGGTCGAGGGCATCGCCGCCTTCACGCCCGAAGGGCGCTTTCTCTCGGCCAACCGCAGCGCGCAGTTCCAGCTCGGCATGTCGTTCGGCGCGCTGCAGGCGCACACCTTCTCGTCGCTGTTCAACCTGCCGATGTCGGCGCTGTTCGAGCTGTTTGCCGGCAGCGCCGCCACGCCGCACCAGCTGTGCCTGCACAACGGCGTGTCCGTCTGGTGCCGCACCGAGGTCAAGCCTGCCAGCCCCTGGGCCACGCCCATCGTCTCGCCCCTGGCCGAGGCCGGCACGCCGCCAGTGCGCATCGCCCCGGTGCCCAAGGGGCAACTGTCGTCGCTGCAGTACCTCGACACGGGCGATGCGCAGCTGTCGGCCATCATCGCCAAGCTGCGCAAGGTGGTGGACCGCGACATTCCCGTGATGATCCTGGGCGAGACTGGCACGGGCAAGGACCTGCTGGCGCAGGCCATGCACAACGACTCGGTGCGCGCACGCCAGCCCTTCGTGGCCGTCAACTGCGCCTCGATCCCCGACACGCTGATCGAGGCCGAGCTGTTCGGCTACGAGGAAGGGGCCTTCACCGGCGCGCGCAAGAAAGGCGCGTCCGGCAAGATCCTGCAGGCCCACGGCGGCACGCTGTTCCTCGACGAGATCGGCGACATGCCCAAGCACCTGCAGGCGCGGCTGCTGCGCGTGCTGCAGGAGCGCAAGGTGAGCCCCCTGGGCGCGGGCAAGGAGGTGGAGGTGGATGTGACCGTCATCAGCGCCACGCACAAGAACCTCAAGGAGCTGATCGCGCGCGGCGACTTCCGCGAAGACCTGTACTACCGCCTCAACGGCCTGGTCGTGCGCCTGCCCGCGCTGCGCGAGCGCAGCGATTTCGGGGCCGTGGTGAAGAAGGTGCTTCATGCGCTCGAAGGCAACGCGCACATCGCCATCGCCCCGCAGGTGATGGAACTGCTGCAGGCCTACCACTGGCCGGGCAACGTGCGCCAGCTGCACAACCTGCTGCGCACGGCCTGCGTGATGGTGGACGAGGACTGCACCATCCGCCTGGAGCATCTGCCCGACGATTTCCTCGACGAGCTGCGCGCGCCCATGCACCCCCTGGCCATGCCGCTGCCCGCGCCGGAGCTGCCCCTGGTGCCCAGCGTGGGCGCGCCGGCGCTGTGCGCCGACGACCTGGGCGAGGACGGTCACAGCCTGCACGACGTGACCCTCAACGCCATGGCACAGATGTTGCGGCTGCACAAGGGCAATGTGTCGGCAGCGGCCAAGGCGCTGGGCGTTTCGCGCAACACCATCTACCGCAAGAAGAACCTGCTGCCGCCCGACCTGCTCGATTGA
PROTEIN sequence
Length: 669
MGTMPTRPSDMAVQTPPPPPDAIAVIDEANQRSLAFGVSTDDEPDFTSLGIGHLKDSLEENRFLFQHAVPVMETLRGQIANTHSMVLLTSAQGMVLHSMGDSDFLEKASEVALVPGMDWSEKTKGTNAIGTALTAQQAITVHGDQHFMRTNHALTCSCAPILDPYGEIVGALDVTGDHRSYHQHTLALVRMSAQMIENHMFASSFPKAVRLHFHARPEFLGTLVEGIAAFTPEGRFLSANRSAQFQLGMSFGALQAHTFSSLFNLPMSALFELFAGSAATPHQLCLHNGVSVWCRTEVKPASPWATPIVSPLAEAGTPPVRIAPVPKGQLSSLQYLDTGDAQLSAIIAKLRKVVDRDIPVMILGETGTGKDLLAQAMHNDSVRARQPFVAVNCASIPDTLIEAELFGYEEGAFTGARKKGASGKILQAHGGTLFLDEIGDMPKHLQARLLRVLQERKVSPLGAGKEVEVDVTVISATHKNLKELIARGDFREDLYYRLNGLVVRLPALRERSDFGAVVKKVLHALEGNAHIAIAPQVMELLQAYHWPGNVRQLHNLLRTACVMVDEDCTIRLEHLPDDFLDELRAPMHPLAMPLPAPELPLVPSVGAPALCADDLGEDGHSLHDVTLNAMAQMLRLHKGNVSAAAKALGVSRNTIYRKKNLLPPDLLD*