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scn_reactorb_scaffold_48863_29

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(34409..34924)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 171.0
  • Bit_score: 292
  • Evalue 2.30e-76
Peptide deformylase n=1 Tax=Acidovorax sp. CF316 RepID=J0KGP6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 171.0
  • Bit_score: 292
  • Evalue 1.60e-76
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 171.0
  • Bit_score: 292
  • Evalue 6.00e-77

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGGGGATTCGCGCCTGCTGCGCGTGGCCCAGCCTGTCACGGCTTTCGATACCACTGCGTTGCATGGCTTGGTGCGTGACATGCTCGACACCATGCGTGCGGCGAATGGGGCCGGATTGGCCGCGCCACAGATCGGGGTGGACTTGCAGCTGGTGGTGTTCGGCGCGCCACGGCCCAATCCGCGCTACCCTGGCCGGCCCCTGGTACCACCCACGGTACTGGCCAATCCAGTGATCACGCCGCTGGGGGCTGAGGAGGAGTCGGATTGGGAAGGGTGCCTGTCCGTTCCCGGCTTGCGTGGCTGGGTGCCCCGCTGGACGCGCATTCGCTACCAGGGCTTCGATCCCTATGGCGATCCCATCGACCGGGTGGTGGACGGATTCCATGCCCGTGTGGTGCAACATGAGTGCGACCATTTGCAAGGCGTGCTCTACCCCATGCGGGTGCGGGACTTCGCGCGCTTTGGCTTCACCGAGGTGCTTTTTCCTGACGGAAGCATGGCTGAAGACGATTGA
PROTEIN sequence
Length: 172
MGDSRLLRVAQPVTAFDTTALHGLVRDMLDTMRAANGAGLAAPQIGVDLQLVVFGAPRPNPRYPGRPLVPPTVLANPVITPLGAEEESDWEGCLSVPGLRGWVPRWTRIRYQGFDPYGDPIDRVVDGFHARVVQHECDHLQGVLYPMRVRDFARFGFTEVLFPDGSMAEDD*