ggKbase home page

SCN18_10_11_15_R1_P_scaffold_716_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 1..1620

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2S2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 558.0
  • Bit_score: 563
  • Evalue 1.60e-157
TonB-dependent receptor {ECO:0000313|EMBL:EYR67014.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 549.0
  • Bit_score: 564
  • Evalue 9.80e-158
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 550.0
  • Bit_score: 547
  • Evalue 4.30e-153

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1620
GGCCTGAAGAACCGCATGAACACCACCACGCAGAAGACGCTGGCGGTGACCACGGGCCTGAAGGGCATGCTCGGCGACAACTGGAACTGGGAAGGCGCCTACAACCACTCCCAGTACAAGGCCGACGTGAAGATGCCGCGCATCAAGGCCGACGCAGCCAACCGCCTGTTCCTGGGCGAGCGGCTGGGCTACGACGACGACGGTTATGCGATCTACAACCCGGATCCGGCACGCCTGTTCAAGCCGCTGACGCCGGCCGAGTTCGCCTCCATCGCGGCGATGTCCACCTTCCATCCCGAAGCCAAGAACGACAACGTCAGCTTCACCGCCGACACCCCGGCGCTGTTCTCGCTGCCGGCCGGCGACGTCGGCTTTGCCGGCGTGGTCGAATACGGCCGCCAGTCCTATGCGATCCATCCCGACCCGCTGGCGCTGACCGCCGACGCCTACTACGGCCCGCAGTACGGCGACGGCAGCGGCAGCCGCAACCGCTGGAGCGCCGCCGGCGAGCTGCGCGTGCCGGTGGTCTCCAACCTGCAGGCCAGCCTGGCCGGCCGCTACGACCGCTACAGCTTCGGCAACAGGCATCCCGGCAAGTTCACCTACAGCGCCGGCCTGGAATGGCGTCCGCTCGATACCCTGCTGGTGCGCAGCTCCTACGGCACGGGCTTCCGCGCGCCGGACATGCACTACCTGTTCGCCGACGACGACTACTACCGCAAGACTTCGACGGACTATTACCACTGCCGCCAGGACGAGCCGGGCTTCAGCAACGGCGAGTGCTGGGACGAAGGCGACTGGGACACCAATACGCTCGACGTCTATTCCGGCAACAGGAACCTGGACGTGGAGACCAGCAAGTCGTTCACGGCAGGCTTCGTGTGGTCGCCCATCGCCAACTTCGACCTGGCGGTGGATTACTACAAGATCAAGGTGATGAACCAGGTGCAGTCGCAGGACCGCGAAAGCCTGCGCATCACCGAAGCCAACTGCCGCCTCGGCAATACCGACACCGGTGCGACCGTCGATCCCACCTCGCCGACCTGCGTGGACGCGATGGCACGGGTGATCCGCAACAGCAACGGCGACATCACCAGCGTCCACTTCGCGCCGATCAACATCGCCCGCGAGGAGACCTCCGGCATCGACGTGGCCGCGAACTACCGCCTGCAGACCGCGGCGGCCGGCAACTTCAGCTTCACCGGCACCTATACCTGGGCCCATCGCCATACCCGCCAGCAGTACCCGGGCGACCCGACCGAGGACATGCTGTCGGTGAGCTTCAGCGATACCACCCTGCCGCGGGTCAAGTCCAACCTGGGCGTGACCTGGGACAAGGGTGAGTGGGGCGCCAGCCTGTTCGGCGATTACCTGGGCCGCGTCGCCAACTACGACAACGACGCCTGGACCGAAGCCACCTGGCGCTTCAATGCCGGTGCGCGCTACGACATCAACGACCACCTGCGGGTGTCGCTGTCGGTCAACAACCTGTTCGACAAGATGCCGCCGCGCGACGCGACCTGGGCCGCGTACCCGTACTACAACACCTCGTGGTTCGACGCGATCGGCCGCAGCTACTTCGTGCAGGTCACCTGGAAACTGGGCGGCAAGCCGCTGTAA
PROTEIN sequence
Length: 540
GLKNRMNTTTQKTLAVTTGLKGMLGDNWNWEGAYNHSQYKADVKMPRIKADAANRLFLGERLGYDDDGYAIYNPDPARLFKPLTPAEFASIAAMSTFHPEAKNDNVSFTADTPALFSLPAGDVGFAGVVEYGRQSYAIHPDPLALTADAYYGPQYGDGSGSRNRWSAAGELRVPVVSNLQASLAGRYDRYSFGNRHPGKFTYSAGLEWRPLDTLLVRSSYGTGFRAPDMHYLFADDDYYRKTSTDYYHCRQDEPGFSNGECWDEGDWDTNTLDVYSGNRNLDVETSKSFTAGFVWSPIANFDLAVDYYKIKVMNQVQSQDRESLRITEANCRLGNTDTGATVDPTSPTCVDAMARVIRNSNGDITSVHFAPINIAREETSGIDVAANYRLQTAAAGNFSFTGTYTWAHRHTRQQYPGDPTEDMLSVSFSDTTLPRVKSNLGVTWDKGEWGASLFGDYLGRVANYDNDAWTEATWRFNAGARYDINDHLRVSLSVNNLFDKMPPRDATWAAYPYYNTSWFDAIGRSYFVQVTWKLGGKPL*