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SCN18_10_11_15_R1_P_scaffold_5391_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(276..635)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Xanthomonas axonopodis RepID=UPI000311C64F similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 119.0
  • Bit_score: 226
  • Evalue 1.30e-56
50S ribosomal protein L20 {ECO:0000313|EMBL:KHD65552.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 119.0
  • Bit_score: 226
  • Evalue 1.80e-56
LSU ribosomal protein L20P similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 119.0
  • Bit_score: 224
  • Evalue 8.20e-57

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCACGAGTTAAGCGTGGTGTGCAGGCGCGCCGCCGCCACAAGAAGATCATCAGCCAGGCGAAGGGCTACTACAATGCCCGCCGCAAGGTTTTCCGCGTCGCCAAGCAGGCGGTCATCAAGGCGCAGCAGTACGCCTATATCGGCCGCAAGCAGAAGAAGCGCAATTTCCGTTCGCTGTGGATCACCCGCATCAATGCGGCTGCCCGCATCAACGGCATGAGCTACAGCCGTTTCATGAACGGCCTGCTCAAGGCTGGCATCACCCTGGATCGCAAGGTGCTGGCGGACATCGCCGTGCACGACGCGGCGGGTTTTGCCGCGCTGGCCGAGAAGGCCAAGGGCGCGCTGGCGGCATAA
PROTEIN sequence
Length: 120
MARVKRGVQARRRHKKIISQAKGYYNARRKVFRVAKQAVIKAQQYAYIGRKQKKRNFRSLWITRINAAARINGMSYSRFMNGLLKAGITLDRKVLADIAVHDAAGFAALAEKAKGALAA*