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SCN18_10_11_15_R1_P_scaffold_2779_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 707..1006

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=22 Tax=Xanthomonas RepID=IHFA_XANAC similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 196
  • Evalue 9.10e-48
integration host factor, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 196
  • Evalue 2.60e-48
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1418095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni MAFF 301420.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 196
  • Evalue 1.30e-47

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCATTGACCAAGGCGGAGATGGCCGACCGGTTGTTCGACGAGGTCGGCTTGAACAAGCGCGAGGCCAAGGAGTTCGTCGATGCGTTCTTCGACGTGCTGCGCGATGCATTGGAACAGGGACGTCAGGTGAAGCTGTCCGGCTTCGGCAATTTCGACCTGCGGCGCAAGAACCAGCGCCCGGGCCGCAATCCCAAGACCGGGGAGGAGATTCCGATTTCCGCCCGCACGGTGGTCACCTTCCGTCCGGGCCAGAAGCTCAAGGAGCGGGTGGAGGCATATGCTGGATCCGGGCAGTAA
PROTEIN sequence
Length: 100
MALTKAEMADRLFDEVGLNKREAKEFVDAFFDVLRDALEQGRQVKLSGFGNFDLRRKNQRPGRNPKTGEEIPISARTVVTFRPGQKLKERVEAYAGSGQ*