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SCN18_10_11_15_R1_P_scaffold_7134_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 528..944

Top 3 Functional Annotations

Value Algorithm Source
iojap family protein n=1 Tax=Xanthomonas arboricola RepID=UPI0002D35857 similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 136.0
  • Bit_score: 224
  • Evalue 3.30e-56
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 136.0
  • Bit_score: 224
  • Evalue 4.70e-56
hypothetical Iojap-like ribosome associated protein similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 136.0
  • Bit_score: 221
  • Evalue 8.00e-56

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
TTGACCACCGAATCCCAAGTCATCAAGACCCAGTTGCCCAATCCGCCGCCGTCCGTTCCGGCCCTGCTGGCCTCCGTCCATGCCGGACTGGAAGAACTCAAGGCCAGGGATGTCGTGGAGATCGACGTCCGCGGCAGATCCAGCGTCGCGGATTTCATGGTCATTGCTTCGGGTACCTCGACCCGCCACGTCAAATCCATCGGCGATGAAGTGGTGCGTTTCGCCAAGAACCTGGGCGTGATGCCGCTGGGCGTGGAAGGCGAGCGCGAGGCCGAGTGGGTGCTGGTGGACCTGGGCGACGTGATCGTCCACGTGATGCTGCCGCGCGTGCGCGAGTTCTACGCGCTCGAGCGCCTGTGGACGGTGGGCGACCAGCCGCCCTCGTCCGCCGAGGGAGAAGAGCAGGAAGCCGGCTGA
PROTEIN sequence
Length: 139
LTTESQVIKTQLPNPPPSVPALLASVHAGLEELKARDVVEIDVRGRSSVADFMVIASGTSTRHVKSIGDEVVRFAKNLGVMPLGVEGEREAEWVLVDLGDVIVHVMLPRVREFYALERLWTVGDQPPSSAEGEEQEAG*