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SCN18_10_11_15_R1_P_scaffold_5964_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 366..1604

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 414.0
  • Bit_score: 664
  • Evalue 6.90e-188
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13) similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 415.0
  • Bit_score: 661
  • Evalue 1.20e-187
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D50CB2 similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 414.0
  • Bit_score: 679
  • Evalue 1.10e-192

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
GTGAGCCGCACGATGCCGCTGTCGCAGCTGTTGCCCGACCTGGCGCTGGCGTCCGACCCGCAGATCGGCGGGCTGGTGCTGGACTCGCGCCAGGTGCGCCCCGGCGACGCCTTCGTCGCCATCGCCGGCTTCGGCGCGCATGGGCTGGGTTTCGTCGAGCAGGCCCGCGCGGCCGGTGCCAGCGCCATCCTGTTCGATCCGCCGGCACCGGCGCAGCTGCCGGCGCCGGCCGACGCCATCGCCGTGCCCGGCCTGCGCCAGCGCATGGGCGCGATGGCCGACCAGTTCCACGGCCATCCTTCGCATGCGATGACGATGGTCGGCGTGACCGGCACCAACGGCAAGACCTCGACCGTGCAGTTGCTGGCCCAGGCCTGGCATCTGCTGGGCCGCCGCAGCGGCAGCATCGGCACGCTGGGCGTCGGCCTGTACGGCGACGTGGTGCCGACCGGCTTCACCACGCCGCTGGTGCTGCAGATGCATGAAGTACTGGCGCAGCTGCGCGATGCGGGCGCGCAGGCGGTGGCGATGGAAGTCAGCTCGCATGCGCTGGACCAGGGCCGCGTCGATGCCGTGCATTACGACGTGGCCGTGTTCACCAATCTCACCCGCGACCATCTCGATTACCACGGCGACATGGCCAGCTACGGCGCGGCCAAGGCGCGCCTGTTCCATCGCGAGGGCCTGAAGGCGGCAGTGATCAACCTGGACGATGCCTTCGGCCGCGAACTGATCACCACCCTGGCCGCGGGTATCCAGGCCATCGGCCTGAGTTCGACCGGGCAGCCCGGCGCTGCAATCCGCGCCGAGACGCTGGTGCTGGACGGACAGGGCATCGGTTTCGACCTGGTGATCGGCGAGGAGCGCCATCCGCTGCGTTCGCCGCTGCTGGGCCGTTTCAACGCCGACAACCTGCTGGCCGTGGCCGGCGCGCTGCATGCGCTGGGCCAGCCGGCGTCGACCATCGCCGACGTGCTGGGCAGGCTGCAGCCGATCCGCGGCCGCATGAACCGCCTCGGCGGGCAGGGCGAGCCGACCGTGGTCATCGATTACGCGCACACGCCCGACGCGCTGGAGCAGGCGCTGCGCAGCCTGCATGGCCATCTCGACGGCCGCCTGCTGTGCGTGTTCGGCTGCGGCGGCGAACGCGATACCGGCAAGCGTCCGCAGATGGCGGCCATCGCCCAGGCGCATGCCGACGTGGTGTTCGTCACCGACGACAACCCGCGCGGCGAGGAC
PROTEIN sequence
Length: 413
VSRTMPLSQLLPDLALASDPQIGGLVLDSRQVRPGDAFVAIAGFGAHGLGFVEQARAAGASAILFDPPAPAQLPAPADAIAVPGLRQRMGAMADQFHGHPSHAMTMVGVTGTNGKTSTVQLLAQAWHLLGRRSGSIGTLGVGLYGDVVPTGFTTPLVLQMHEVLAQLRDAGAQAVAMEVSSHALDQGRVDAVHYDVAVFTNLTRDHLDYHGDMASYGAAKARLFHREGLKAAVINLDDAFGRELITTLAAGIQAIGLSSTGQPGAAIRAETLVLDGQGIGFDLVIGEERHPLRSPLLGRFNADNLLAVAGALHALGQPASTIADVLGRLQPIRGRMNRLGGQGEPTVVIDYAHTPDALEQALRSLHGHLDGRLLCVFGCGGERDTGKRPQMAAIAQAHADVVFVTDDNPRGED