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SCN18_10_11_15_R1_P_scaffold_3662_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 931..1704

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=5 Tax=Stenotrophomonas maltophilia RepID=G0JZL8_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 200.0
  • Bit_score: 355
  • Evalue 2.30e-95
Transcriptional regulator {ECO:0000313|EMBL:CCP17920.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 207.0
  • Bit_score: 366
  • Evalue 2.40e-98
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 200.0
  • Bit_score: 355
  • Evalue 6.60e-96

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGGATCCGTACTCGATGGTATGGATTCGTGGCCATGCCTGTCAATACTGGGTGGTATGGATGGAAAATGCCTTGTCCGCCATGGCTTTGGCGAGCATCCATGGGCTGTCGCGCGGGGTATTGGCGCGGCGCATACTGCAACCAGTCCCCGGCGTATGGTTAAATCAGCGGATGAACGAATCTTCAGCTTCCCCGGCGGAAACCCGCAGTACACGCAACAGCCGCCTCAGTGCGGACGACTGGGCCCAGGCGGCCCTGGACCTGATCGCGGAGCAGGGGGTCGGGGCCGTCGCGGTGGAGCCGCTGGCCCGCCGCCTCGGCGTCACCAAGGGCAGCTTCTACTGGCACTTTCCGTCCCGCGACGCCCTATTGCAGGCCGCGCTGGAACGCTGGGAGCTGGTCGAGCAGCAGCAGGTGTTCGGAAGCCTGGAAGAGGTTCCGGATCCGCGCACCCGCCTGCGCGCGCTGTTCCAGCTCGTCGCGCACGAAGTGACGCCGCATGTCATCTACAGCGAACTGCTCAAGGCGCTGGACAACCCGCTGGTGCGCCCGGTGATCGACCGCGTCTCGCAGCGCCGCCTGGACTACCTGATGGCCTCGTTCCGCCAGGCCGGGCTGAGTTCCACCGACGCCCGCCACCGCGCGCGCCTGGCCTATGCCGCGTATGTCGGCTTCCTGCAGCTATCCCTGCAACTGCAGCAGCCGAAGCAGGCGCGCGAGGAGTTCGAATCCTACGTCGAGCATGTGATCGAGACCTTGATTCCGAACGGGTGA
PROTEIN sequence
Length: 258
MDPYSMVWIRGHACQYWVVWMENALSAMALASIHGLSRGVLARRILQPVPGVWLNQRMNESSASPAETRSTRNSRLSADDWAQAALDLIAEQGVGAVAVEPLARRLGVTKGSFYWHFPSRDALLQAALERWELVEQQQVFGSLEEVPDPRTRLRALFQLVAHEVTPHVIYSELLKALDNPLVRPVIDRVSQRRLDYLMASFRQAGLSSTDARHRARLAYAAYVGFLQLSLQLQQPKQAREEFESYVEHVIETLIPNG*