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SCN18_10_11_15_R1_P_scaffold_7859_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 731..1339

Top 3 Functional Annotations

Value Algorithm Source
ligand-gated channel n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030A1D46 similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 211.0
  • Bit_score: 272
  • Evalue 2.10e-70
Ligand-gated channel {ECO:0000313|EMBL:AHY57982.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 194.0
  • Bit_score: 271
  • Evalue 8.40e-70
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 201.0
  • Bit_score: 269
  • Evalue 4.90e-70

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGAACCGCAAGTCCAGTACGCTCGCCGTTGCCGTCGCCATCGCCCTCGGCCTCCAGGTTGCCACCGCCTTCGCCCAGTCCGGCGCGCAGACGCTCGATACCGTGATCGTGACCGGCACCCGCGTCGCCGACCGCACCGTGGCCGAATCGCAGTCGCCCATCGACATCATCACCCCCGAGGCCCTGCAGGCCACCGGCTCCACCGAGCTGGCCACCGCGCTGTCGCGCGCCCTGCCCTCGCTCAACTTCCCGCGCCCGGCCCTGACCGACGGCACCAGCGGCGTGCGCCCGGCGCAGCTGCGCGGCCTGTCGCCGGACCAGGTGCTGGTGCTGGTGAACGGCAAGCGCCGCCACAACTCGGCGCTGGTCAACACCGACAGCAAGATCGGCAAGGGCACCACGCCGGTGGACTTCAACGCCATCCCGGTCAGCGCGATCAAGCGCATCGAGGTGCTGCGCGATGGCGCCGGCGCGCTGTACGGCTCGGACGCGGTGGCCGGCGTGATCAACGTGATCCTCGACGACGCCCCGCAGGGTGGCGCAATGGAAGCCAGCTTCGGCGCGCACCACACCGACCTGGAGCCGATCGGCCGCACCCTGACCGATGGC
PROTEIN sequence
Length: 203
MNRKSSTLAVAVAIALGLQVATAFAQSGAQTLDTVIVTGTRVADRTVAESQSPIDIITPEALQATGSTELATALSRALPSLNFPRPALTDGTSGVRPAQLRGLSPDQVLVLVNGKRRHNSALVNTDSKIGKGTTPVDFNAIPVSAIKRIEVLRDGAGALYGSDAVAGVINVILDDAPQGGAMEASFGAHHTDLEPIGRTLTDG