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SCN18_10_11_15_R1_P_scaffold_995_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(36..1328)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGJ9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 426.0
  • Bit_score: 565
  • Evalue 3.30e-158
TonB-dependent receptor plug {ECO:0000313|EMBL:EIL98590.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 426.0
  • Bit_score: 565
  • Evalue 4.60e-158
cyclic nucleotide-binding protein similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 437.0
  • Bit_score: 548
  • Evalue 8.90e-154

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
GTGCTCGATAACCGTCTCGCTTCCGCCGTCTGCCGTGCGCTGCTGCTGTCCTCCGCCCTTGCCCCGGCTTCCGTGCTTGCCCAGGATGCGGCCAGCGCTTCCCGCTCCTCCGCCAAGGACCTGGATACGGTCATCGTCACCGGCCGCAGCGGCACCGGCGTGCGCACCAAGGCCGAGACCAGTTACTCGATCACCAACATCGAGGAAGAGCAGCTGCGCATGCAGGCGCCGACCAGCGTGACCGAGGCGCTCAAGTCGGTGCCCGGGTTCTGGGTGGAAGCCTCCGGCGGCGAGGCCAGCGGCAACATCCGCGCGCGCGGCATCCCGGTCGACGGCTTCGGCTCGGTCACCCTGCTGGAAGACGGCATCCCGGTGGTGCACGACCCGGCGCTGGGCTACCTCAACGGCGACCAGGCATTCCGCCTGGACGAGACCATCGAACGCATCGAGGTGGTACGCGGCGGACCGGCATCGGTGATGTACTCCAACGCCCCGGCCGGCGCGATCAACTTCATCCCGCGCCAGGTCGGCGAGGACGCCAGCGGCGTATTCAAGTACACCGTCGGCGACAGCGGCCTGAACCGCCTGGACTTCGCCTACGGCAGCCCGCTGGCCAATGGCTGGAAGCTGCTGCTGGGTGGCTTCTACCGGGTCGAGGACGGCGTGCGCGATCCCGGCTTCAACAGCAACGATGGCGGCCAGTTCCGCCTCAACCTGGCCAGGGAGTTCGAGGGCGGGCGTTTCAGCATCGACGCCAAGCGCATGGATGACCGCGTCGCCCTGTACCTGGGCATCCCGATGTACACCAACGGCAACGGCGACATCCGCGCGGTGCCCGGCTTCGATGGCAACCACGGGACGCTGGCCGGTCCGGAAACCCGCTACCTGTCGATGAAGACCGCCGATGGCCGCGGCTGGGACTTCGACAACAGCGAAGGCACCCATGTGAAGCGCGACCAGCTCACGTTCAAGCTGGAGACCGGGCTGGGCGGCGACTGGGAACTGGCGCAATCGGCGCGCTTCAGCCGCACCGACACCATCCGCAACGGCGTGTTCCCCAACTCGCTGACGCCGGCGGCCACGTTCCTCGCCGGGCAGAAGAACCTGCTGGCGTCGGTGCCGGGCGCCACCGCGCTGGGCCTGCGCTACGTGAATGGAAGCGGCGGCTTCGATACCGCCAGCCAGAACGGCAATGGCCTGCTGGTGATCGGCGGCCTGCGCGGGCTGGACATCCCGGTGCGCGAGTTCGTCAGCGAGACGCGGCTGATGCGCAGCTGCGCGCTCGGCGGCTAG
PROTEIN sequence
Length: 431
VLDNRLASAVCRALLLSSALAPASVLAQDAASASRSSAKDLDTVIVTGRSGTGVRTKAETSYSITNIEEEQLRMQAPTSVTEALKSVPGFWVEASGGEASGNIRARGIPVDGFGSVTLLEDGIPVVHDPALGYLNGDQAFRLDETIERIEVVRGGPASVMYSNAPAGAINFIPRQVGEDASGVFKYTVGDSGLNRLDFAYGSPLANGWKLLLGGFYRVEDGVRDPGFNSNDGGQFRLNLAREFEGGRFSIDAKRMDDRVALYLGIPMYTNGNGDIRAVPGFDGNHGTLAGPETRYLSMKTADGRGWDFDNSEGTHVKRDQLTFKLETGLGGDWELAQSARFSRTDTIRNGVFPNSLTPAATFLAGQKNLLASVPGATALGLRYVNGSGGFDTASQNGNGLLVIGGLRGLDIPVREFVSETRLMRSCALGG*