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SCN18_10_11_15_R1_P_scaffold_2408_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 477..1055

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 192.0
  • Bit_score: 355
  • Evalue 3.20e-95
3-isopropylmalate dehydratase, small subunit n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L927_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 192.0
  • Bit_score: 355
  • Evalue 2.30e-95
3-isopropylmalate dehydratase small subunit similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 192.0
  • Bit_score: 354
  • Evalue 1.40e-95

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGGCCGGTTTCCGTACCCTGAGCTCGCGCAGCGTGGTGCTGCGCCAGACCAACATCGACACCGACCAGATCATCCCGGCGCGGTTCCTCTCCACCACGGAACGCGCGGGCCTGGGCAAGAACGCCTTCAACGACTGGCGCTGGCAGGCCGACGGTTCGCCGAACCCGGAATTCGCCTTCAACCAGCCGCAGAATGAAGGCCGCTCGATCCTGCTGGCCGGCCGCAACTTCGGCTGCGGCTCCTCGCGCGAGCATGCGCCGTGGGCGCTGACCGACCTGGGCCTGCGGGCAATCGTGAGCAGCGAGATCGCCGACATCTTCCGCGGCAATTCGCTGAAGAACGGCCTGCTGCCGATCGTGCTGGACGAAGCCGACGTGCAGGAACTGATGCAGCGCCCGGACGACGAGCTGACCATCGACGTGGCCACGCGCGAACTGCGCACCCCCGCCGGCAAGGTGTACACCTTCCCGCTGGACGGCTTCTCGCAGACCTGCCTGCTGGAAGGCGTGGACCAGCTGGGCTGGCTGCTGGGCCGCGTGCCGGAGATCGAGCGGTACGAAAGCCAACGCCACGCCTGA
PROTEIN sequence
Length: 193
MAGFRTLSSRSVVLRQTNIDTDQIIPARFLSTTERAGLGKNAFNDWRWQADGSPNPEFAFNQPQNEGRSILLAGRNFGCGSSREHAPWALTDLGLRAIVSSEIADIFRGNSLKNGLLPIVLDEADVQELMQRPDDELTIDVATRELRTPAGKVYTFPLDGFSQTCLLEGVDQLGWLLGRVPEIERYESQRHA*