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SCN18_10_11_15_R1_P_scaffold_2599_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 470..1579

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilM n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SW61_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 369.0
  • Bit_score: 646
  • Evalue 9.50e-183
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:CCP40325.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 369.0
  • Bit_score: 646
  • Evalue 1.30e-182
pilM; type 4 fimbrial biogenesis protein PilM similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 360.0
  • Bit_score: 629
  • Evalue 3.40e-178

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGCGCGGGCGCAACACATGCGTCCAAGTGCCCGTCGGCAGGGGAGAAACCGTGGGGCTTATCCCAAAGAGTCAGCCACCGATCATCGGTGTTGACATCAGTTCGACTGCGGTGAAGCTGCTTCAGCTCGCCCGCAGCGGCAACCGCTTTCGCGTGGAACATTACGCCGTGGAACCGCTTCCGCCGAATGCGGTGGTGGAAAAGAACATCGTCGAGGTCGAGGCGGTCGGCGAGGCCATACGTCGTGCCGTGGCGCGCTCGGGAACCCGCGCCAAGGGCGCGGCGGCCGCGGTGGCCGGTTCGGCGGTGATCACCAAGGTGATCCCGATGCCGGCCGAGCTGGACGAGGCCGACATGGAAGCCCAGGTCGAACTGGAGGCGGTGAACTACATCCCGTATCCGATCGAGGAAGTGAGCCTGGACTTCGAGGTACTCGGGCCGGTGCCCAACAACCCGGAAATGGTCCAGGTGCTGCTGGCGGCCTCGCGCTCGGAAAACGTCGAACTGCGCCAGTCGGCGCTCGAACTGGGCGGGTTGACGGCCAAGGTCATGGACGTGGAAGCGTTCGCGATCGAGAACGCCTTCGCGCTGGTGGCCAGCGAACTGCCGGTGGCCAGTGACGGCGTCGTGGCGCTGGTGGACATCGGCGCGACCATGACCACGCTCAACGTCCTGCGCGGCGGACGCAGCCTGTACAGCCGTGAGCAGGTGTTCGGCGGCAAGCAGCTCACCGACGAGGTGATGCGCCGCTACGGCCTGAGCTACGAGGAGGCCGGGCTGGCCAAGCGCCAGGGCGGCCTGCCGGAGAGCTATGAAGTCGAGGTGCTGGTGCCGTTCAAGGAGGCCACGGTCCAGCAGATCGGCCGCCTGCTGCAGTTCTTCTATGCCGGCAGCGAGTTCAATCGCGTCGACCACATCGTGCTGGCTGGCGGCTGCGCTTCGCTGCCGGGCCTGCCGACGATGGTCGAGGAGCAGCTGGGGGTGAGCACGTCGGTGGCCAATCCGCTGGCGCAGATGACGCTGGGGCAGAAGGTGCAGGCGCATGCGCTGGCCCAGGATGCCCCGGCCCTGATGATCGCCACCGGCCTGGCCCTGCGGGGGTTCGACTGA
PROTEIN sequence
Length: 370
MRGRNTCVQVPVGRGETVGLIPKSQPPIIGVDISSTAVKLLQLARSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAVARSGTRAKGAAAAVAGSAVITKVIPMPAELDEADMEAQVELEAVNYIPYPIEEVSLDFEVLGPVPNNPEMVQVLLAASRSENVELRQSALELGGLTAKVMDVEAFAIENAFALVASELPVASDGVVALVDIGATMTTLNVLRGGRSLYSREQVFGGKQLTDEVMRRYGLSYEEAGLAKRQGGLPESYEVEVLVPFKEATVQQIGRLLQFFYAGSEFNRVDHIVLAGGCASLPGLPTMVEEQLGVSTSVANPLAQMTLGQKVQAHALAQDAPALMIATGLALRGFD*