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SCN18_10_11_15_R1_P_scaffold_10023_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(3..1124)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 407.0
  • Bit_score: 222
  • Evalue 8.20e-55
Ribonuclease E n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SPV8_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 427.0
  • Bit_score: 220
  • Evalue 2.20e-54
ribonuclease, Rne/Rng family similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 427.0
  • Bit_score: 220
  • Evalue 6.30e-55

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
GAACAGCAGGCGCAGCAGGGCAAGCAGCAGCGCAACAACGAACAGCAGCAGCCCAAGCAGCAGAAGCAGCCCAAGCAGCCCCGGCCGCAGCAGGAAGCGGACAAGGCCGCCCCGCCGCTGAGCGAGAAACCGGCGAGGCAGCCGCAGGCCGAAGCGCCGCGTCCGCTCGCTCCTGCCGCGCAGGTTGCCCCGGCCGCCGCCGTGGTAGTCGCCGCCGTGGCCACGGAAACGTCCGAAGCGCCGGTCAAGACGCTGCCGCCGATGGCCGTGGAAGACGGCGCGCCGGTGGCCGCAACGGCCGAACAGCCGGTGGTCGCCAGCGTGGATGAAGCCAATGCCGCTCCCACCACCGACGACGCCAATGGCGACGGCGCCAGCCGCCGCCGTCGCGGCCGCCGTGGTGGCCGTCGCCGTCGCCGCGGCAATGCGGAAGGCACCGGCAGCGCCGATGCCGACGTGCTGGGCAATGACGACGACATCGCCGACGAGGGCGAGGACATCGGCCACGAGGCCGCCGAACCGGCAGCCGTGCCGGCCGCGGCCCAACCCGAGTTCGATTTCGACGACGAACCCGCAATCGTGGAAGCCCCTGCCCGCGCACCGCGCACCGCGCAGACCGCCGCGCCCGGCACGCAGCAGGTCGAGTCGGCTGAAAAGGCCGTCGCCGCGGCCGAAGCCGTGGCAGAAGTCGTTGCGCCTGCCGCCGTTGCAGCGGCTCCCGCGCAGCCGGAACCAGCAGTGGAAGCGGCCGTGCCGTCGCCTGCCCCGGAAACCACGCCTGTCGCCAAACCGGTGGTGGAAGCCGTGCAGCCTGTCGCCGCGCCGGTGCAGCCGGAAACCCACCCGGAGCCGGTCGTCGCCGCCGAACCTGCCGCGCCGGCAGAAGCGGTCGTCGTTGCCGAGGAACCGGCTGCCGATACGCCCGCTGCGACGCCCGTTGCCCAGGCCGCGCCCGAGCCGGCCTTGCCGGAAAACGGCCAGTTGTTCGCCGAAGCGGCGGCACCGGCACCGGCAACCAAGGAAAAACATGAGGCTGCTGTCGAGGCGCCGCACGCCCCGGCCGTGGAGTCCGTGGAAGCCGAGGTCGCGACGACCGATGCCGAGGCGAACGCGGACGAGCCG
PROTEIN sequence
Length: 374
EQQAQQGKQQRNNEQQQPKQQKQPKQPRPQQEADKAAPPLSEKPARQPQAEAPRPLAPAAQVAPAAAVVVAAVATETSEAPVKTLPPMAVEDGAPVAATAEQPVVASVDEANAAPTTDDANGDGASRRRRGRRGGRRRRRGNAEGTGSADADVLGNDDDIADEGEDIGHEAAEPAAVPAAAQPEFDFDDEPAIVEAPARAPRTAQTAAPGTQQVESAEKAVAAAEAVAEVVAPAAVAAAPAQPEPAVEAAVPSPAPETTPVAKPVVEAVQPVAAPVQPETHPEPVVAAEPAAPAEAVVVAEEPAADTPAATPVAQAAPEPALPENGQLFAEAAAPAPATKEKHEAAVEAPHAPAVESVEAEVATTDAEANADEP