ggKbase home page

SCN18_10_11_15_R1_P_scaffold_9185_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(922..1197)

Top 3 Functional Annotations

Value Algorithm Source
biopolymer transporter n=1 Tax=Xanthomonas sp. M97 RepID=UPI00039F63C5 similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 89.0
  • Bit_score: 154
  • Evalue 3.70e-35
Biopolymer transport protein exbD {ECO:0000313|EMBL:CCP38481.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 91.0
  • Bit_score: 154
  • Evalue 6.70e-35
biopolymer transport protein similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 89.0
  • Bit_score: 150
  • Evalue 1.50e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
AGCGACCAGCGCAATGCCGAGCCGCCGCGCTCGCTCAGCGTGCTGGTCAACGCCGATGGCCGCTATTTCATCAACGACCGCGAGGTGCTGCGCACCGACGTGGAATCGGTGAAGCGGACCATCATCCAGGTCGCCGGCGACGACCGCAGCCAGACCGTGCTGCTGCGCGCCGACGCGCGCACGCCTTACCAGGCCGTGGTGACGGTGCAGGATGCGCTGGGCCAGCTCGGCTTCCGCCGCATTGCCATCGCCACCGCGCCGGAGGCGCAGCAATGA
PROTEIN sequence
Length: 92
SDQRNAEPPRSLSVLVNADGRYFINDREVLRTDVESVKRTIIQVAGDDRSQTVLLRADARTPYQAVVTVQDALGQLGFRRIAIATAPEAQQ*