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SCN18_10_11_15_R1_P_scaffold_8895_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(3..1223)

Top 3 Functional Annotations

Value Algorithm Source
RNA helicase, partial n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003807BCA similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 367.0
  • Bit_score: 621
  • Evalue 4.70e-175
RNA helicase {ECO:0000313|EMBL:AHY57199.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 367.0
  • Bit_score: 624
  • Evalue 6.00e-176
ATP-dependent RNA helicase similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 368.0
  • Bit_score: 612
  • Evalue 6.20e-173

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
GAACGCGAATACCCCTGGCTGGAAGCGACCTGTTTCGCCCGGGAAGGTGGCGGAAACGACCATCCACGCCTGTCGTTGGCCTGCCGGAGGCGCATGGCGAGCGCGTATGCTTGCGCACACATGAAAGTCGCCGAATTCCCTATTTCCCCACTGCTGCCGCGGATCACCGACAGCCTCGTCACGCACCCGCGCCTGGTGCTCGAAGCCCCGCCCGGCGCCGGCAAGACCACCCAGGTGCCGCTGGCGCTGCTCGACGCGCCCTGGCTGCAGGGCGGGAAAATCGTGATGCTGGAGCCGCGCCGGGTCGCCGCGCGCAGCGCCGCGCAGTTCATGGCCCGGCAGCTCGGCGAGCCGGTCGGCGAGACCGTCGGCTACCGCATCCGCTTCGAGAACAAGGTCTCCGCGCGCACCCGCATCGAGGTCGTCACCGAGGGCATCCTCACCCGCATGCTGCAGGACGACCCCCTGCTTGAAGGGGTGGGCGCACTGCTGTTCGACGAATTCCACGAACGTCACCTGTCAGCCGACCTGGGCCTGGCGCTGGCGCTGGACGTGCAGGCCGGGCTGCGCGAGGACCTGCGCATCGTGGTGATGTCGGCCACGCTCGACGGCGAGCGGCTGGCGGGCTTCCTCGACGCACCGCGCCTGTCCAGCGAGGGCCGCAGCTTCCCGGTGGACGTGAGCCACTTCCCGGCGCGGCGCGACGAGGCGCTGGAAGCGCAGGCGCGGCGGGCGGTCGAACATGCGCTGGCGACGCATCCGGGCGACGTGCTGGTGTTCCTGCCGGGGCAGCGCGAGATCGCGCGCGTGCAGGCCGCGCTGGAGCCGGTGCTTCCGGGCGACAGCGATGTCCTGCCGCTGCATGGCGAACTGCCCGTCGAACAGCAGTCGCGCGTGCTGCAGCCCGATCCGGACGGGCGGCGCCGCGTGGTGCTGGCCACCAACGTGGCCGAATCCTCGGTGACCCTGCCCGGCGTGCGCGTGGTGATCGACGCCGGCCTGGCGCGCGAGCCGCGCTACGACCCCAACAGCGGTTTCTCGCGGCTGGACGCGGTGGCGATCTCGCAGGCTTCGGCCGACCAGCGCGCCGGCCGTGCCGGCCGCGTGGCCGCCGGCTGGGCGCTGCGGTTGTGGCCGCAATCGCAGCGGCTGGAACCGCAGCGGCGGCCGGAGATGGCGCAGGTGGAGCTGGCCGCGCTGGCGCTGGAACTGGCCGCCTGG
PROTEIN sequence
Length: 407
EREYPWLEATCFAREGGGNDHPRLSLACRRRMASAYACAHMKVAEFPISPLLPRITDSLVTHPRLVLEAPPGAGKTTQVPLALLDAPWLQGGKIVMLEPRRVAARSAAQFMARQLGEPVGETVGYRIRFENKVSARTRIEVVTEGILTRMLQDDPLLEGVGALLFDEFHERHLSADLGLALALDVQAGLREDLRIVVMSATLDGERLAGFLDAPRLSSEGRSFPVDVSHFPARRDEALEAQARRAVEHALATHPGDVLVFLPGQREIARVQAALEPVLPGDSDVLPLHGELPVEQQSRVLQPDPDGRRRVVLATNVAESSVTLPGVRVVIDAGLAREPRYDPNSGFSRLDAVAISQASADQRAGRAGRVAAGWALRLWPQSQRLEPQRRPEMAQVELAALALELAAW