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SCN18_13_7_16_R2_B_scaffold_2884_5

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(2915..5173)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B40710 similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 749.0
  • Bit_score: 739
  • Evalue 2.20e-210
ABC-type branched-chain amino acid transport system, permease component (LivM) {ECO:0000313|EMBL:CCH80069.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 747.0
  • Bit_score: 712
  • Evalue 5.30e-202
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 428.0
  • Bit_score: 360
  • Evalue 1.00e-96

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Taxonomy

SCN_Thiobacillus_53x → SCN_Thiobacillus_53x → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2259
ATGAGTTCCGTCTCCAACAGTGGCATCCCGTTGCGCTCCGGGAGCCCGCTCCGCGCGTTTCTCGCCAAGCCGTGGGTCAAGCGGCTCGCGTCCTGCCTCTTCGGCGGCTTCGTCCTCTGCCTGATGATCGGTAACCAGGAGGGGAGTCAGACCGACTTCGGCTTGGCCTTCAACCAGGCGACCAGGACCGGTCGCCTGGCGCTCTTCCTGGCCATCGGTGTCGCCCTCTTCACGCTCATCACGTTCTGGTCCTACGTCGCGCCCTACCTCCGGCATCCAGGCGCGATGCCGGTCCTCGTGGGCTTCGGCGTCGTCCTGATCGCGATGGTCCTGCTGCGCTGGTACGACCCGATCGGCAAGCTCGGCCCGCTCTCCTCCCAGGTCAGCGACAGCTCCGGCGCACCGTGGACGGTGTCGCTCTTCTTCGGCCCCGGCGCCTGGATCATCCTGGTCGCCTGCGTGCTCCTCGGCGGCGTCGCCGTGGCGACCCGGCTCGCCGTCCTGGGGTACGCGCACGTTGTCCTGTCGGTGCTGGCGGCCGTCCTCGTCTTCACGGCCCACACCCAGCTGGTGAGCTACGCCAGCAGTGGCTCGTTCCGCGGCCCCGACCACTCGCTGGGCATGTGGTTCGCCAGCGGTGGCTATCTGATCCTGGCTCTGGGCGGCCTGGTCGTCGCTCGTGCTCAGGCCGAGTTCGCCGACCCGCTCGCCGCCCTCAACCGCGGCCTCGATTGGCGCCCCGGCCTGCCGCTGGCCGCCGCCGGGTTCGGGCTGGGCCTCATCGCCTTCTTCGACGCGGCCTGGTTCGCGCCGCAGCAGGTGAACTGGGACTTCTCGCAGACGCACACCAACTTCTCCGGCACCGGTCTGCAGCAGTACGCGACGACCTACCTGTCCTGGCTCGGCATCGCGCTGCTGTTCGTCGTCGGTGCGCTCGCGATCGTGGCGAGCGTGCTCCGGAACCGGCTGCTGTCGTGGGGCGCGGCCGCTCTCGGGCTGGTCGCCACGATCCTCACCCTCGCGACGATGTACCAGGTCGCGAAGGTCGGGGCCGAGAAGGGCGCGAACTACGGCAAGCGGTGGATCAACCTCGGTGCCGGTGGCTGGGTGGCCTGCCTGGGCTTCGCCCTGCTGCTCACCGGGGCGGTGTTAGCCGCGCGCGGCACCCGGATCCGGATCCCGGCCGTGGCCCGGTCCGCGCCGCAGACCGGTCTGCGCGGCTCGACCGGTTCGGCGGTGATGCGGACCGCGGTCGGCCTCGCCGTCTGCATGGCGCTCTTCTATCCGCCGACCCTGCCCGGCAACTGGCAGAACGTGCTCGTGGTGCAGATCGCGCCGTACCTGCTGCTCGCCGTAGGCCTCAACGTGGTGGTCGGCTGGGCCGGCCTGCTCGACCTCGGGTACATCGCGTTCTACGGCGTCGGCTCGTACACGACGGCCTACCTCACCGGGTCGCTGCCGGTGAAGCCGCCGAGCTGGCTGCACTTCAGCCCGCTGGTCGCGATCCCGTTCGCCATCGTGGCCTGCCTGATCGCCGGCGTGCTGCTCGGGGCGCCGACCCTGCGACTGCGCGGTGACTACCTCGCCATCGTGACCCTCGGCTTCGGCGAGATCATCGAGGTCGTCGCCAACAACGCCAGCGGCTTCACCGGGGGCCCCATCGGTCCGCGGGTCCCGCACCCGGACCTCAAGATCGGCTCGCTGCACATCACCTGGGGTCTGGACAACCTGCCGTACTGGTATCTGCTCCTGGTGATCCTCGCGATCGTGATCCTGTTGCTCTACCGGCTGGAGGGTTCGCGGCTGGGACGGGCCTGGGCGGCGATCCGCGAGGACGAGGTCGCGGCCCAGGCCAGCGGCGTCCGCACCACGCGGGTGAAGCTCCTGGCCTTCGCGATCGGCGCGTCCACGTCGGGCGTGGCGGGCGTCTTCTTCGCCAGCCAGGTCGGCTACTTCGATCCGTCGCAGTTCGTACTGCAGAACTCGATCCTGGTCGTCGCCTACGTCGTCTTCGGCGGCATGGGCTCGCTCGCCGGCGCGCTGGCCGGCGCGGCGGCCCTGACCTGGCTGCCGTACTTCTTGCAGTCCCAGGTGCCGCTCGCCGACAGCCAGATGTGGATCGGGGCCATCGTCTTGCTGATGATGATCTTCCGCCCGGCCGGCCTCATCCCGGCGCGGCGTCGCCGAGCCGAGCTCGGCGGCCTCGACTCACCGGCCAGCTCCGAGGTGTCGGCCGTCCCGGCGGGGGAGGGGCTGTAG
PROTEIN sequence
Length: 753
MSSVSNSGIPLRSGSPLRAFLAKPWVKRLASCLFGGFVLCLMIGNQEGSQTDFGLAFNQATRTGRLALFLAIGVALFTLITFWSYVAPYLRHPGAMPVLVGFGVVLIAMVLLRWYDPIGKLGPLSSQVSDSSGAPWTVSLFFGPGAWIILVACVLLGGVAVATRLAVLGYAHVVLSVLAAVLVFTAHTQLVSYASSGSFRGPDHSLGMWFASGGYLILALGGLVVARAQAEFADPLAALNRGLDWRPGLPLAAAGFGLGLIAFFDAAWFAPQQVNWDFSQTHTNFSGTGLQQYATTYLSWLGIALLFVVGALAIVASVLRNRLLSWGAAALGLVATILTLATMYQVAKVGAEKGANYGKRWINLGAGGWVACLGFALLLTGAVLAARGTRIRIPAVARSAPQTGLRGSTGSAVMRTAVGLAVCMALFYPPTLPGNWQNVLVVQIAPYLLLAVGLNVVVGWAGLLDLGYIAFYGVGSYTTAYLTGSLPVKPPSWLHFSPLVAIPFAIVACLIAGVLLGAPTLRLRGDYLAIVTLGFGEIIEVVANNASGFTGGPIGPRVPHPDLKIGSLHITWGLDNLPYWYLLLVILAIVILLLYRLEGSRLGRAWAAIREDEVAAQASGVRTTRVKLLAFAIGASTSGVAGVFFASQVGYFDPSQFVLQNSILVVAYVVFGGMGSLAGALAGAAALTWLPYFLQSQVPLADSQMWIGAIVLLMMIFRPAGLIPARRRRAELGGLDSPASSEVSAVPAGEGL*