ggKbase home page

SCN18_13_7_16_R2_B_scaffold_2539_2

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(1442..2377)

Top 3 Functional Annotations

Value Algorithm Source
Putative RpiR-family transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VV59_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 270.0
  • Bit_score: 230
  • Evalue 1.80e-57
putative RpiR-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 270.0
  • Bit_score: 230
  • Evalue 5.10e-58
Putative RpiR-family transcriptional regulator {ECO:0000313|EMBL:AGZ39575.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 270.0
  • Bit_score: 230
  • Evalue 2.50e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 936
GTGGCCGGTCGGACGAATGGACGCCGCGCGGGCGGGTCGGCGACGGCCGTCGCCACAGAGGTGGTCGCAGGGTCGACGAACGGCGCCGCACCGGTGCAGCTCGACTCGTTGTTCGTGGAGCAGATGAGGTCGGGCGAGCTCACGCCGGCGCAGCGCCGCATCGCGCGCTACATCTGCGACCACGGGCACGAGGTCGCCTTCCTGTCCAGCGTCGAGCTGGCGTCGCGGGTCGGGGTGAGCCAGCCGTCGGTGACCCGCTTCGCCACCGCGACCGGCTTCGCCGGCTACGGCGCGATGATCGACGCGGTGCGCGACGTCGTCCTCGGTGCCCGCCCGGCCCCGCCGACGACCGGGCTCAACCGGATGCAGCTGGCGGTCGAGCACAGCATCGACAGCCTGCGGTACCTGCGCGACCAGCTGGCCGACCTCGGACCGCTCACCGAGGCGGCCCAGCTGCTCGCGCAGTCCGACCCGATGCCGGTCTTCGGCTTCCGCGGTTCGGTGCCGCTCGCGTCGTGGTTCTCCTTCTTCGCCTCCAAGATCCATCCGAGCGTCATGGCGTTGTGGGGCAGCGACAGCCACCTGCTCGAGAAGCTGGCCCAGGCTCGGCTCGCCGGCGCGACGGCGATGCTCGCCATCGTCATGCCCCGGTACCCGGCCCAGGCCGAGCTCACCCTGCAGGCGGCCCGACGCGAGGGGCTGAAGGTGGTGCTGCTGGTCGATTCGACCCTCACGCCGCTGGCCGAGTACGCCGACGTGCTGCTGCCGGCCCCGGTGAACCCCGACTTCATGTTCGACTCGCAGGTCGCGCCGGTGCAGCTCGCCGCCGCCCTGCTGGAGCTGCTGGCCGACGTGGCCCCCGAGCGGACCCAGCAACGGCTCAACCGACTCGAGGATCTCGCGGCCGAGCACTCGTTCTTCCTCAACTCCGAGTGA
PROTEIN sequence
Length: 312
VAGRTNGRRAGGSATAVATEVVAGSTNGAAPVQLDSLFVEQMRSGELTPAQRRIARYICDHGHEVAFLSSVELASRVGVSQPSVTRFATATGFAGYGAMIDAVRDVVLGARPAPPTTGLNRMQLAVEHSIDSLRYLRDQLADLGPLTEAAQLLAQSDPMPVFGFRGSVPLASWFSFFASKIHPSVMALWGSDSHLLEKLAQARLAGATAMLAIVMPRYPAQAELTLQAARREGLKVVLLVDSTLTPLAEYADVLLPAPVNPDFMFDSQVAPVQLAAALLELLADVAPERTQQRLNRLEDLAAEHSFFLNSE*