ggKbase home page

SCN18_13_7_16_R2_B_scaffold_2664_5

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(3992..4459)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I3X5_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 134.0
  • Bit_score: 144
  • Evalue 8.40e-32
Transcriptional regulator {ECO:0000313|EMBL:EOD67216.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 134.0
  • Bit_score: 144
  • Evalue 1.20e-31
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 138.0
  • Bit_score: 114
  • Evalue 2.60e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGACCACCCGGACCAGCCGTGCCCCGGAGGCCGCATCGCGGGTGTGGATCGCGCTGCACGAGTTCGTGACCGGCCAGGACCGCCGGGCGGCGCTACGTGCCGCGCTCGGTCTCGGGCCGGGAAAGGTCGAGGTTCTGATCAAGCTCACCGACCGGCCGATGACCCTGCGAGAAATCGCTCGCGCTGTCGAGATCGACCCACCCGCCGCGACCGTCGGCGTGGACAAGCTCGAAGCGAAGGGGCTGGTTCACCGCACGCCCCACCCCGACGACAACCGCGCCAAGCTCGTGCATCTCACCGACGCCGGACGCGAAGCGGCCGCACGCGGCCAAGCGATCCTCGACGAACCGCCATCCGCGCTGGCCGACCTCGACCCCGAGGATCTCGCCGGGCTGGCCGAGATCGTCGGCCGCCTACGCGCCGCCACTGACCTCCGGGCCCAGCGGAGACAGAGCCAGCAGAGATAG
PROTEIN sequence
Length: 156
MTTRTSRAPEAASRVWIALHEFVTGQDRRAALRAALGLGPGKVEVLIKLTDRPMTLREIARAVEIDPPAATVGVDKLEAKGLVHRTPHPDDNRAKLVHLTDAGREAAARGQAILDEPPSALADLDPEDLAGLAEIVGRLRAATDLRAQRRQSQQR*