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SCN18_13_7_16_R2_B_scaffold_5827_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 2..757

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD4 components-like protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SH05_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 214.0
  • Bit_score: 335
  • Evalue 2.40e-89
Type IV secretory pathway VirD4 components-like protein similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 214.0
  • Bit_score: 335
  • Evalue 6.90e-90
Type IV secretory pathway VirD4 components-like protein {ECO:0000313|EMBL:ABL81090.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 214.0
  • Bit_score: 335
  • Evalue 3.40e-89

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 756
GCCGACGTGATCGCCCGCGGCGGCACGATCTACCTGCTCGGCCGCGACGACCCGTACGCCTCGGCGTCGCCGCTGATGACCGCGATCGCCGAGCACGTGCTCGACACCGCGCTGCTGATGGCCACCGCGTCTGCGCACGGGCGGTTGTGCCCGTCGTTCCTGGCCTGCTTGGACGAGCTGCCCTCCACCACGCCGCTGCCGACGCTGCGGACCCGGATGGCCAACGAGCGGGCGCTTGGGCTGAGCTTCATCTACGCCGCCCAGACCTGGCGGCAGCTGGTCATCTGCTACGGCGAGGACGAGGCCCGCGCGCTGTTCGGGCTGACCAATAACCTGATCGTCTTCGGCGGTTCTAAGGACGGGCTGTTCAACCGCGAGATCTCCGAACTCATCGGCACCACCCGGGTGGCTCGCACCACCTACAGCACCGGCCAGGGCGGCTGGGGCAAGTCCACGGTCGGTGAAGACGTGCCGATCCTCCGCCCGGAGGAGATCCGCCAGCTCGCCGAGCGTGAGGCGCTCGTCGTGGCCGAGAACGCCCGTCCGCTGATCGCCCGGCTCGATCGGTGCATCGACGGACCCCACGGCCAAGCCCTGCTGGCCGCGCAGGCCGCCGCCCGCGCCCGGGTGGGCGCCGCTCGCAAGGCCCGCCCCGACATGGCAGCCCGCACGGCCGAGGCGGTGCAGCTGGCCCGCGAACTCGAGCTGCAACCCACCGGGTCGCCGTTCACCCAGCACGGAGAGGCAGGCCAGTGA
PROTEIN sequence
Length: 252
ADVIARGGTIYLLGRDDPYASASPLMTAIAEHVLDTALLMATASAHGRLCPSFLACLDELPSTTPLPTLRTRMANERALGLSFIYAAQTWRQLVICYGEDEARALFGLTNNLIVFGGSKDGLFNREISELIGTTRVARTTYSTGQGGWGKSTVGEDVPILRPEEIRQLAEREALVVAENARPLIARLDRCIDGPHGQALLAAQAAARARVGAARKARPDMAARTAEAVQLARELELQPTGSPFTQHGEAGQ*