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SCN18_13_7_16_R2_B_scaffold_4542_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(3..563)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 189.0
  • Bit_score: 283
  • Evalue 2.00e-73
ribosomal protein S12 methylthiotransferase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B68431 similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 186.0
  • Bit_score: 289
  • Evalue 1.50e-75
2-methylthioadenine synthetase similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 186.0
  • Bit_score: 280
  • Evalue 3.40e-73

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 561
GTGTCCGAGCCCCCCCGCAGCGTCGCGTTGGTGACGCTCGGCTGCGCCCGCAACGAGGTCGACTCCGAGGAGCTCGCCGGCCGTCTCGACGCCGCCGGATGGGCCGTGGCCACCGATCCGGAGCGCGCCGACGTCGTCCTCGTCAACACCTGCGGCTTCATCGACTCGGCCAAGAAGGACTCGATCGACACCCTGCTGGCCGCCGCCGACACCGGCGCCAAGGTGGTTGCGGTCGGCTGCCTGGCCGAGCGCTACGGCGACCAGCTCGCCGAGTCGCTGCCGGAGGCCGACGCGGTGCTCGGCTTCGACTCCTACGCCGACATCGCCGCACGCCTCGACGACGTCGCGGCCGGCCGCGCGATCACCCCGCACGTCCCACGTGACCGTCGCACGCTGCTGCCGATCAGCCCGGCGCAGCGTCCGGCGGCAACGACAGAGGTGGCACTGCCCGGCCACGGCTGGGTGCCGTCCACCGCGGTGCGCAACCGTCTCGACGACGCTCCGGTCGCGTATCTCAAGCTCGCCTCCGGCTGCGACCGGCGCTGCACGTTCTGCGCGATC
PROTEIN sequence
Length: 187
VSEPPRSVALVTLGCARNEVDSEELAGRLDAAGWAVATDPERADVVLVNTCGFIDSAKKDSIDTLLAAADTGAKVVAVGCLAERYGDQLAESLPEADAVLGFDSYADIAARLDDVAAGRAITPHVPRDRRTLLPISPAQRPAATTEVALPGHGWVPSTAVRNRLDDAPVAYLKLASGCDRRCTFCAI