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SCN18_13_7_16_R2_B_scaffold_4639_2

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(939..2723)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B53CFE similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 612.0
  • Bit_score: 912
  • Evalue 1.10e-262
Arabinose efflux permease family protein {ECO:0000313|EMBL:KJE19421.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 575.0
  • Bit_score: 714
  • Evalue 1.10e-202
transmembrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 616.0
  • Bit_score: 713
  • Evalue 3.80e-203

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1785
GTGCGCGACTCCGCAGCCCACGAGCGGCGAGTGGCCCTGTCGGTGACGACGGTCGGCATCCTCGCGGCGACGCTCAACTCCTCGATCCTCTTGATCTCGCTCCCGGCGATCTTCAAGGGGCTCGGCCTCAACCCGCTCGCCCCCGAGAACATCTCCTACCTGCTCTGGATGTTGATGGGCTTCCTGCTCGTCACCGCCGTGCTGGTCGTGACGTTCGGCCGGCTGGGCGACCAATACGGTCGGGCCAAGATCTTCAACCTGGGCTTCCTGATCTTCACGATCGCCTCGATCGGCTGCGCTCTCGTGCCGAGCAGCGGCTCGGCCGGCGCGCTGGAGATCATCCTCATGCGGATCGTGCAGGGCGTCGGCGGCGCGATGGTGATGGCCAACTCGACGGCGATCATCACCGACGCGTTCCCGGCCGACCGCCGCGGCTTCGCCCTCGGCGTCAACCAGGTCTCGGCCCTCGCCGGCTCGTTCCTCGGCCTGGTGATCGGCGGCGTGCTGTCCGAGTGGGACTGGCGCGCGGTCTTCTGGGTGAGCGTCCCGGTCGGCGTCTGGGGCACCTGGATGGGCTACCGGACACTGCACGACAAGCCTCGCGACACGAGCCGTCGGGTGACCATCGACTGGTGGGGCAACCTCACCTTCGGCGTCGGCCTCATCGCCGTCCTGGTCGCGATCACGTACGGCCTGCAGCCCTACGGCGGGCACACGATGGGCTGGACGTCACCCAAGGTCCTCGCCGGCCTGATCGGCGGGGTGGTGCTCCTCATCGTCTTCGGGTTCATCGAGACGCGCGTCGCCGAGCCGATGATCAACCTGCGGCTGTTCAAGATCCGAGCCTTCGCCGCCGGTCAGGCGGTGAACCTGCTCGCCGCGATGTCGCGCGGTGGTCTGCAGTTCATGCTCATCATCTGGCTGCAGGGCATCTGGCTGCCGCTGCACGGCTACAAGTTCGCCGACACCCCGCTCTGGGCCGGCATCTACATGCTGCCGCTCACCGTCGGCTTCCTCATCGCCGGACCGGCGTCGGGCGCTGTCTCCGACCGCTTCGGCGCGCGGGCCTTCGCCACCGGCGGGCTGCTGCTTACCGCCGCGACCTTCGCCGGCCTGATCGCCCTGCCGGCCGACTTCAACTACGTCCTCTTCGCCGGCCTGCTCGCCCTCAACGGCATCGGCATGGGTCTCATGGCCGCCCCCAACTCGGCCGCGATCATGAACGCCGTCCCGGCCACGCAGCGCGGCGCCGCGTCCGGCATCCGGGCCACCGGCATGAATGCCGGCATGGTGCTGTCGATGGGGGCGTTCTTCACGCTGATGGCCGTCGGCCTGGCCAGCCGCCTGCCCAACGCGATGCAGCACGGCCTCACCGCAGCTGGCGTGACCACGGGCGACGCGCACGCCGCCGCCAGCACCTCCCCCGTCGGCCTGCTGTTCGCGGCCTTCCTCGGCGACAACCCGATCAAGGACCTGGTGCCGCACGCAACGGGCTCGACGGCGCAGACCATCTACAGCGGTCACTTCTTCCCGAACCTGATCTCCGACCCGTTCCGGCACGGCCTGCTCATCGCGTTCAGCGCCTCGATCGTGATGCTGCTGCTCGCCGCCGGCGCCTCGCTGATGCGCGGCGAGCGCTACGTCCACGAGGACGCCGACGGCGCGGTGCACCACGACGCGGTCGCCGAGGCCACCGCCCGCGAGGGCGACGCACTGGCCGTCCCCGCTCTGCCCGGCGAAGAGGTCGCGTTCGACGACGCCGTAGCCGGACGCCCGACCTCCTAG
PROTEIN sequence
Length: 595
VRDSAAHERRVALSVTTVGILAATLNSSILLISLPAIFKGLGLNPLAPENISYLLWMLMGFLLVTAVLVVTFGRLGDQYGRAKIFNLGFLIFTIASIGCALVPSSGSAGALEIILMRIVQGVGGAMVMANSTAIITDAFPADRRGFALGVNQVSALAGSFLGLVIGGVLSEWDWRAVFWVSVPVGVWGTWMGYRTLHDKPRDTSRRVTIDWWGNLTFGVGLIAVLVAITYGLQPYGGHTMGWTSPKVLAGLIGGVVLLIVFGFIETRVAEPMINLRLFKIRAFAAGQAVNLLAAMSRGGLQFMLIIWLQGIWLPLHGYKFADTPLWAGIYMLPLTVGFLIAGPASGAVSDRFGARAFATGGLLLTAATFAGLIALPADFNYVLFAGLLALNGIGMGLMAAPNSAAIMNAVPATQRGAASGIRATGMNAGMVLSMGAFFTLMAVGLASRLPNAMQHGLTAAGVTTGDAHAAASTSPVGLLFAAFLGDNPIKDLVPHATGSTAQTIYSGHFFPNLISDPFRHGLLIAFSASIVMLLLAAGASLMRGERYVHEDADGAVHHDAVAEATAREGDALAVPALPGEEVAFDDAVAGRPTS*