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SCN18_13_7_16_R2_B_scaffold_4639_3

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 2827..3369

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 182.0
  • Bit_score: 264
  • Evalue 9.10e-68
peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 182.0
  • Bit_score: 263
  • Evalue 2.40e-68
peptide deformylase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B69153 similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 176.0
  • Bit_score: 280
  • Evalue 8.80e-73

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 543
GTGACCGTGCAACCGATCCGCCTCTTCGGCGATCCCGTGCTGCGTACGCCGGCCGATCCGGTCGTCGACTTCGACAAGGAACTGCGCACCCTGGTCGCCGATCTCACGCAGACGATGCTCGCCGCGCCGGGGCGTGGGCTGGCCGCCCCGCAGATCGGCGTCGGGCTGCGCGTCTTCGCCTACCACGTCGACGACTCGATGTCCGGTCACCTGGTCAACCCGGTCCTGCACTTCCCGGACGACGAGGAGCAGGACGGCCCCGAGGGCTGCCTGTCCATCCCCGACCTGAGCTTCGACTGCCGGCGCCGGGCCAACGTCGTCGCCCACGGGCAGAACATGTACGGCGACCCGGTGACGGTCGAGGGCACGGCCCTGCTCGCCCGCTGCATCCAGCACGAGACCGACCACCTCGACGGCGTGCTGTTCGTCGACCGGCTCGACACCGAGACGCGTAAGGCCGCGATGCGGGCGATCCGCGACGCGCCCTGGGCCGGACAGGCCAACCCCACCATCAAGGTCAGCCCGCACGGTTCGCCGCGGTGA
PROTEIN sequence
Length: 181
VTVQPIRLFGDPVLRTPADPVVDFDKELRTLVADLTQTMLAAPGRGLAAPQIGVGLRVFAYHVDDSMSGHLVNPVLHFPDDEEQDGPEGCLSIPDLSFDCRRRANVVAHGQNMYGDPVTVEGTALLARCIQHETDHLDGVLFVDRLDTETRKAAMRAIRDAPWAGQANPTIKVSPHGSPR*