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SCN18_13_7_16_R2_B_scaffold_5538_3

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 413..1312

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 293.0
  • Bit_score: 406
  • Evalue 1.90e-110
5-hydroxymethyluracil DNA glycosylase n=1 Tax=Streptomyces sp. SS RepID=UPI0003134281 similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 293.0
  • Bit_score: 406
  • Evalue 1.30e-110
formamidopyrimidine-DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 293.0
  • Bit_score: 406
  • Evalue 3.80e-111

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Taxonomy

SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 900
GTGCCGGAACTCCCCGAGGTCGAGACCGTCCGCGACGGCCTCGCGCGCTGGATCGCCGGCCGCACGATCACCGAGGTCGAGGTCCGTCACCCTCGCGCCGTGCGACGGCACGCGGCCGGCGGAGCCGATCTGGCCGCCCGCCTCGCCGGCCGCACGATCCACGCCGCCTCGCGCCGCGGCAAGTACCTCTGGCTGCCCCTCGCCGACACCGACGAGACGGTGGACGAGGCGCTCATCGCCCACCTCGGGATGAGCGGCCAGCTCCTCGTCCAGCCCTCGGACGCGCCGGACGAGAAGCATCTCCACGTCCGCGTCAGGTTCAGCGACGGCGAGCGGGAACTGCGCTTCGTCGACCAGCGGACCTTCGGCGGGCTGGCGCTGGACCACCTCGTCCCGGCCGCCGATCGCCCGGCCGAACGGCTCCCCGCGCCGATCGTCCACATCGCCCGCGACCCTGTCGACCCGTTCTTCGACGACGTCGCCTTCACCGCCCGCCTTCGCCGGCGCGACACCGAACTCAAGCGGGCGCTGCTCGACCAGTCGCTGATCTCCGGGATCGGCAACATCTACGCCGACGAGGCCCTCTGGCGCAGCCGGCTGCACGGTCAGCGCCGCACGGGCACGCTCACCCGGCCAGTAGTGGCCGAGCTGCTGGGTCACGTCCGCGCCGTCCTGGGCGACGCCCTGCGCGCCGGCGGGACCTCCTTCGACGCCCTGTACGTGAACGTCAACGGGCAGAGCGGCTACTTCGACCGTTCGCTCGCCGTCTACGGGCGCGAGGGCGAGGCGTGCCGGCGGGACGGGACGCCGATCCGCCGGGTCGCGTTCATGAACCGCTCCAGCTTCTTCTGCCCGACCTGCCAGCGCCCGCCCCGTCGCCGGGTCGAGTCGGGGCGGTAG
PROTEIN sequence
Length: 300
VPELPEVETVRDGLARWIAGRTITEVEVRHPRAVRRHAAGGADLAARLAGRTIHAASRRGKYLWLPLADTDETVDEALIAHLGMSGQLLVQPSDAPDEKHLHVRVRFSDGERELRFVDQRTFGGLALDHLVPAADRPAERLPAPIVHIARDPVDPFFDDVAFTARLRRRDTELKRALLDQSLISGIGNIYADEALWRSRLHGQRRTGTLTRPVVAELLGHVRAVLGDALRAGGTSFDALYVNVNGQSGYFDRSLAVYGREGEACRRDGTPIRRVAFMNRSSFFCPTCQRPPRRRVESGR*