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SCN18_13_7_16_R2_B_scaffold_7243_5

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(2468..2767)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 84.0
  • Bit_score: 63
  • Evalue 9.90e-08
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037D65CF similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 84.0
  • Bit_score: 71
  • Evalue 4.40e-10
shikimate kinase similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 87.0
  • Bit_score: 63
  • Evalue 3.40e-08

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 300
TCGGCGACCCGGGCCGCGATCGCCGCGTCCGCCGTCCCGGTGGTCGTGCTGCGGGCCAGCGTCGACGTCCTGCTGACCCGGGTCGGCGACGCCGGTACCCGGCCGCTCCTCGCCGGCGACCCGTCGGGCCGGCTGGCCGTCCTGGCGGCGGAGCGGGCCCCGGTCTACGACGAGCTCGCGGCCTTCGCCGTCGACACCGACGGCCGCACGCCCGGGCAGGTGGCGGCCAGCATCGCCGCCCGGCTGCACGAACGCGAGCCCCACAACACCGGCGTGTCGACGGAGGATCAGCCCCAGTGA
PROTEIN sequence
Length: 100
SATRAAIAASAVPVVVLRASVDVLLTRVGDAGTRPLLAGDPSGRLAVLAAERAPVYDELAAFAVDTDGRTPGQVAASIAARLHEREPHNTGVSTEDQPQ*