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SCN18_13_7_16_R2_B_scaffold_4024_3

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 3248..4093

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilM n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LHI2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 281.0
  • Bit_score: 300
  • Evalue 1.30e-78
pilM; type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 281.0
  • Bit_score: 300
  • Evalue 3.60e-79
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:AGL14720.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 281.0
  • Bit_score: 300
  • Evalue 1.80e-78

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 846
GTGCCTGCCACCACGCTCGTCGGCCTCGACATCGGATCCACGTCGATCCGCGCCCTCGAGGCGACCATCGCCAAGGACCGCCCGGTGATCAACAACTTCGGACACGTCCCGCTCCCACCCGGTGCCGTCGTCAACGGTGTCGCACGCGACGACCGGGCTGTGACGGCCGCCCTGCGCCAGCTCTGGGCCGCGCAGACCTTCTCCACCAAGGATGTCGTCCTGGGCATCACCCACCAGCAGCTGATCGTGCGCGAGCTCGACGTCACGAATCTGCCGCCCCGCGAGCTGCGTCAGGCCCTGCCCTTCCTCGTCCGCGACGTCCTTCCCCTGCCGGTCGAGCAGGCGCTGCTTGACTTCTACCCGCTGGAGGAAGCAGGCAAGGGCAAGGAGACGCTGCACGGGCTGCTCATCGGGGCGCCGAAGGAGCCCGTCATCGAACTGGTCCGCGCGGTCGAGAGCGCCGGTCTGCACGTGGCCCAGGTCGACCTCGCCTGCTTCGCCGCCCTGCGCGCGGCCGCCCACCTGGCCGGCGACACCGAGGCGCTGCTCGACGTCGGCGCCAACGGGACGAACATCATCGTGCACACCGACGGCACGCCGAAGATTGTGCGCGCGGTTCCCCGCGGCGGCGCGGAGATCACCCGGATGCTCGCAACTCGCCTCGATCTGGACGAGAGCGAGGCCGAGTCGCTCAAGTGTCGCGTCGGGATGCAGCCGGACCACGTCACCGAGAGCAGTGACGTAGTGCGGGAGGCCGTCCGCCCACTGATCACCGAGATCCGCAACTCCTTCAACTACTTCGGCGCCGCACATCCCGGGCAGCGGATCAGGCGGCTCGCACTCGTG
PROTEIN sequence
Length: 282
VPATTLVGLDIGSTSIRALEATIAKDRPVINNFGHVPLPPGAVVNGVARDDRAVTAALRQLWAAQTFSTKDVVLGITHQQLIVRELDVTNLPPRELRQALPFLVRDVLPLPVEQALLDFYPLEEAGKGKETLHGLLIGAPKEPVIELVRAVESAGLHVAQVDLACFAALRAAAHLAGDTEALLDVGANGTNIIVHTDGTPKIVRAVPRGGAEITRMLATRLDLDESEAESLKCRVGMQPDHVTESSDVVREAVRPLITEIRNSFNYFGAAHPGQRIRRLALV