ggKbase home page

SCN18_13_7_16_R2_B_scaffold_6231_2

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(579..1484)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Actinopolyspora halophila RepID=UPI000382B056 similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 292.0
  • Bit_score: 305
  • Evalue 5.60e-80
Membrane protein {ECO:0000313|EMBL:KEI43315.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 278.0
  • Bit_score: 303
  • Evalue 1.70e-79
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 274.0
  • Bit_score: 300
  • Evalue 5.10e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGACCGCGGTGGCTCCCCTCGATGCCCTCAACGGAGTGCGCCGCACAGCGGTGCGCCTGCTCGGCTCGTCCTCGAGGAACTCCTACGACCCGGGCCTGGACATCGACTGGGACGCCCCGGTCGGCGACGACAAGGCGTTCATGCCGCTGGAGCGGGTCACGCTCTACGGCACACCGCTCTGGGAGCGGATGACCGAAGCACAGCGCATCGAGCTCTCCCGTCAGGAGATCGCGTCGATCGCCTCCACCGGTCTCTGGTTCGAGGTCATCCTGATCCAGATGCTCGCCCGCTGGGCCTACCACCAGGACCCGCAGGATCCGCGCACGCAGTACGCGATGACCGAGATCGGCGACGAGACCCGGCACATCGTCATGTTTGCCCGCGCCATCTCCACGCTGGGGTCCAAGACCTACCGGCCCAAGCCGGTGATCGACTTCCTGGCCCGCCCGTACAAGGCGCTGGCCAAGGGCGCCACGATCTTCGCTCCGGTGTTGGTGGCCGAGGAGATGCTCGACCGGCTGCAGCGGAGCATGACCACCGACGAGTCGATCAACGAGCTGATCCGGATGGTGAACCGCATCCACGTCGTCGAGGAGGCTCGGCACGTGCGCTTCGCCAAGGAGGAGGTCGCGCGGCAGATGTCCGGCGCCGGTCCGGTGGACAAGGTCATCATCAACCTGGTGTCCGCCCTGGTGTCGGCCTTCGTGGCGGCGTCGCTGATCTCGCCGGAGGTGTACGAGGCCGTCGGCCTCGACCCGAAGGAGGCCGTGAAAGCGGCCCGCAGCAACCCGAACTACGCCGCGACCCGGCGCTGGATGGGCGAGAAGATCATGTCGTTCCTGGACGAGCAGGGCATGGTCACCTGGTACTCGCGGCCCATCTACCAGGCCGTGAGCCTCATCTAG
PROTEIN sequence
Length: 302
MTAVAPLDALNGVRRTAVRLLGSSSRNSYDPGLDIDWDAPVGDDKAFMPLERVTLYGTPLWERMTEAQRIELSRQEIASIASTGLWFEVILIQMLARWAYHQDPQDPRTQYAMTEIGDETRHIVMFARAISTLGSKTYRPKPVIDFLARPYKALAKGATIFAPVLVAEEMLDRLQRSMTTDESINELIRMVNRIHVVEEARHVRFAKEEVARQMSGAGPVDKVIINLVSALVSAFVAASLISPEVYEAVGLDPKEAVKAARSNPNYAATRRWMGEKIMSFLDEQGMVTWYSRPIYQAVSLI*