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SCN18_13_7_16_R2_B_scaffold_8352_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(3..245)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Actinoplanes globisporus RepID=UPI00037CA5CE similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 80.0
  • Bit_score: 116
  • Evalue 7.50e-24
Integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 80.0
  • Bit_score: 115
  • Evalue 6.20e-24
Integration host factor subunit beta {ECO:0000313|EMBL:AGZ45593.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 80.0
  • Bit_score: 115
  • Evalue 3.10e-23

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 243
TTGAACAAGAGCGAGTTGGTCGAAGCCATCGCCGCACGCATCGGTGGAGACCGGAAGACTGCAGCCGCGGCCGTCGATGGCGTGATCGACGAGATCACCCGTGCCCTGGTCAAGGGTGACCGTGTTCAGCTCACCGGCTTCGGCACCTTCGAGAAGCGGGTCCGGGCGGCACGCACGGCTCGTAACCCCGCGACGGGCGCCACGATCAAGGTCAAGAAGACCTCGGTCCCGGCGTTCAAGGCC
PROTEIN sequence
Length: 81
LNKSELVEAIAARIGGDRKTAAAAVDGVIDEITRALVKGDRVQLTGFGTFEKRVRAARTARNPATGATIKVKKTSVPAFKA