ggKbase home page

SCN18_13_7_16_R2_B_scaffold_8460_3

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 991..2061

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7724D similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 356.0
  • Bit_score: 539
  • Evalue 2.10e-150
prfA; peptide chain release factor 1 similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 352.0
  • Bit_score: 516
  • Evalue 4.10e-144
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093, ECO:0000313|EMBL:CCG04762.1}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 352.0
  • Bit_score: 516
  • Evalue 2.00e-143

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGAGTTCCCCCGGACGGCTGCCCGAGCTGCTGGCGGAGTACGCCGAGGTCGAGCAGTCGCTGGCCGATCCGGCGGTACACACCGACCCCGGGCAGGCCCGCACCCTCGGCCGCCGCTTCGCCGAGCTGAGCCCGATCGCCGCGACCGCGCGGGAGCTCGACGCCGCCCGCGACGACCTGTCGACTGCCCGCGAGCTCGCCGCCGAGGACTCCTCCTTCGCCGCCGAGGCCGAGACGCTGGCCGGCCGGATCGCGGAGCTGGAGGAGCGGCTGCGCCACCTCCTGCTGCCGAAGGATCCGAACGACGGCAAGGACGTCATCCTGGAGATCAAGGCCGGTGAGGGCGGGGACGAGTCCGCGCTCTTCGCCGGCGACCTGCTCCGCATGTACCTGCGTTACGCCGAGCGGCAGGGCTGGGCCACCGAAGTCCTCGACGACGAGCCCACCGACCTCGGCGGCAAGAAGTCGGTCACCCTCGCGGTCCGGTCCCGCAAGGCCGACCAGGCGGTCTGGGCCCAGCTCAAGTACGAGGGCGGGGTACATCGCGTGCAGCGGGTGCCGGCGACCGAGTCGCAGGGCCGCATCCACACCTCGGCCGCCGGGGTCCTCGTGCTGCCCGAGGCCGAGGAGGTCGACGTCGAGATCGACCCGAACGACCTCCGTATCGACGTCTACCGCTCGTCCGGCCCGGGCGGGCAGAGCGTCAACACCACCGACTCCGCGGTACGAATCACCCATATCCCCACCGGGACCGTGGTGAGCATGCAGAATGAGAAGAGCCAGCTGCAGAACCGCGAGGCCGGCATGCGGGTGCTGCGCGCCCGGCTCCTGGCCCAGGCCCAGGAGGAGGCCGACGCCGCCGCCTCGGATGCCCGCCGTTCGCAGGTCCGCACGGTCGACCGCTCCGAGCGGGTACGGACCTACAACTTCCCGGAGAACCGGATCAGCGACCACCGCGTCGGGTTCAAGGCCTACAACCTCGACCAGGTCCTCGACGGCGCCCTGGACGACGTCATCGCCGCGCTGCAGCACGCCGACACCGAGGCCCTGCTGGCCGGCGAACCGGAGTGA
PROTEIN sequence
Length: 357
MSSPGRLPELLAEYAEVEQSLADPAVHTDPGQARTLGRRFAELSPIAATARELDAARDDLSTARELAAEDSSFAAEAETLAGRIAELEERLRHLLLPKDPNDGKDVILEIKAGEGGDESALFAGDLLRMYLRYAERQGWATEVLDDEPTDLGGKKSVTLAVRSRKADQAVWAQLKYEGGVHRVQRVPATESQGRIHTSAAGVLVLPEAEEVDVEIDPNDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGTVVSMQNEKSQLQNREAGMRVLRARLLAQAQEEADAAASDARRSQVRTVDRSERVRTYNFPENRISDHRVGFKAYNLDQVLDGALDDVIAALQHADTEALLAGEPE*