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SCN18_13_7_16_R2_B_scaffold_4443_3

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(649..2973)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6D490 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 805.0
  • Bit_score: 1087
  • Evalue 0.0
tRNA/helicase-type nucleic acid binding protein similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 770.0
  • Bit_score: 766
  • Evalue 3.80e-219
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:ABK52966.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 770.0
  • Bit_score: 766
  • Evalue 1.90e-218

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2325
GTGAGCACGGCTGTCGATGTCGACCTGCCCGAGACCCTCGGCTACCGGGTCAAGCGGGTCCTGCTGGGTAAGCCGCTCGTCAACGAGGCGATCTCGGAGGAGAAGCTCTCCAAGAAGATCGCCCTGGGCGTGCTGTCCAGCGACTGCATCTCCTCCTCCGCATACGGCACCGAGGAGATGCTGATCGTCCTGCTGGCCGTCTTCGGCCTCTCGGGCTTCCACATCCTGATGCCGCTGACCGCGGTGGTCCTCGGGGTACTGATCCTGATGACGCTCTCGTACCGCGAGGTCGTCATGATCTACACCCGGGCCGGTGGCTCCTACGTCGTCGCCCGGGAGAACTTCGGCCCCAAGGTGGCGCAGATCGCGTCGGTCGCGCTGCTGATCGACTACATCGTGACGGTGGCCGTCCAGGCGGCGGCCGGTACCGCGGCCATCAGCTCGATCGTCCCGTCGCTGCGGGGCCCCTGGCCGAGCCTAGCCGTCACCCTGGTCGTCATCCTGCTGTTGGCCTACGGCAACCTGCGCGGCATCCGCGAGGCCGGCCGGGCCTTCGCCTTCCCCACCTACCTCTTCGTCGGCGCCGCCGGTGCGGTCGTGGTGGTCGGACTCATCCGGGAGATCTTCGGCGACCTGCCCAAGTACGCGACCGACCTGCACGGCCAGATCACGGTGCTGGACAAACACCACCAGATCCTCTCCGCGATCGCGATCTTCTACCTGCTGCGGGCCTTCGCGAACGGCGGCTCCTCGCTCACCGGACTGGAGGCGATCTCCAACGGGGTGAGCGCCTTCAAGCCGCCCGAGGGGCGCAACGCCCGCAAGACCCTCTCGATCATGAGCGTGCTTCTCGGCTCACTCGTGCTCGGCATCTCCTTCCTCGCGTGGCAGACTCACGCGACCCCTTACTCGAACGGCTCACCCACCGTCATCAGTCAGGTGGCCGCCGCCGCGTTCGGCTCGGGCTGGATCGGTCACGTCCTGCACGTCCTCGTCCAGGTCGCGACGGCGCTGATCCTCTTCACCGGCGCGAACACCCCGTTCACCGGCTTCCCGTTCCTGGCGAGCTTCATCGCCGAGGACTCGTTCCTGCCCAGACAGCTGACCCGCCGCGGGCACCGGCTGGCGTTCAGCTCGGGCATCATCGTCCTCACCGTCGTCGCCTCGGCCCTCCTGCTCGTCGTCGGCGCCAACGTGGACAAGCTGGTGCCGTTCTACGCGATCGGCGTCTTCACCGGCTTCGCGATGGCCGGCTTCGGCATGGCCAAGTACCACCACACGCACCGCGAAGCGTCTTGGCGGCGCAAGTTCGTCATCAACTTCTCCGGCGGCGTGGTCTCCGCGTTGGTCGTGCTCATCTTCGCCGTCGTGAAGTTCACCGAGGGCGCCTGGCTGGTCGTGATCCTCTTCCCACTGGGCTGGGCCGCGCTGATGCGGCTCAACTCGCAGTACCGCTCGGAGGCTCGTTCACTCGACCTCGTCACCTGGATCCGGCAGGACCAGGCCGAGGCGCCGCACTACGGGCGGCACACCATCCTGGTCCTCATCGACCGCCTCGACCTCGCCGTCCTGCGGGCCCTGCGCTACGCCGGCAGCGTGCGGCCGACCGACCTGCGGGTCGTGCACGTCGTCCTGGACGGCCTGGAGGCCGAGCACCTGCAGCAGGAGTGGCTCGCGCGTGGCCTCAACGAGCGCTACCCGCTCGAACTGGTCGAGTGCGACGACCGCCGCCTGGCCCGGGCGGTGAGCGAGCTCGCCCTGGACACCGTCATCAGCGACCGGGCCGAGGTGACGGTCCTGCTGCCGCGGCGCAGCTTCAACCGGGTCTCGCAGCGGCTGCTGCACGACCGGACGGCCGACCGCATCGCCGCCGCCGTCGGACGGATCCCGCACGTCGCGGCGACGATCGTCCCGTTCGACACCACCCTGCCGGCCGGCGCGATCGCCCGGATCGAGGCCCGCCAGGCCGCGGCCGCCGCCGCCCCGGCCCTCACCGCCCGCGCCGAGGACACCGCCCCGACCGGCGCCAAGCTCAAGACCAAGCGGGTGCGCGGCGCCGGTACGACGGCGATCGCCGACGCGGAGTGGCGGCAGAAGGTCACCGTCGAAGGGAAGATCCGCACGGTGCAGCTCGGCGCGGCGGCCGGCCGCTCGCTGGAGGTGCAGATCTTCGACGAGACGGGCGGCATGCGGCTGCTCTTCATGGGACGGACGCAGATCCCGGGCGTCGACTGCGGTGCCGTGCTCCGGGTGACCGGGCGCGTCGGCGAGTACCGCGGACACCTCGCGATCGCCAACCCGAAGTACGAGCTGGTCAGCGCGTAG
PROTEIN sequence
Length: 775
VSTAVDVDLPETLGYRVKRVLLGKPLVNEAISEEKLSKKIALGVLSSDCISSSAYGTEEMLIVLLAVFGLSGFHILMPLTAVVLGVLILMTLSYREVVMIYTRAGGSYVVARENFGPKVAQIASVALLIDYIVTVAVQAAAGTAAISSIVPSLRGPWPSLAVTLVVILLLAYGNLRGIREAGRAFAFPTYLFVGAAGAVVVVGLIREIFGDLPKYATDLHGQITVLDKHHQILSAIAIFYLLRAFANGGSSLTGLEAISNGVSAFKPPEGRNARKTLSIMSVLLGSLVLGISFLAWQTHATPYSNGSPTVISQVAAAAFGSGWIGHVLHVLVQVATALILFTGANTPFTGFPFLASFIAEDSFLPRQLTRRGHRLAFSSGIIVLTVVASALLLVVGANVDKLVPFYAIGVFTGFAMAGFGMAKYHHTHREASWRRKFVINFSGGVVSALVVLIFAVVKFTEGAWLVVILFPLGWAALMRLNSQYRSEARSLDLVTWIRQDQAEAPHYGRHTILVLIDRLDLAVLRALRYAGSVRPTDLRVVHVVLDGLEAEHLQQEWLARGLNERYPLELVECDDRRLARAVSELALDTVISDRAEVTVLLPRRSFNRVSQRLLHDRTADRIAAAVGRIPHVAATIVPFDTTLPAGAIARIEARQAAAAAAPALTARAEDTAPTGAKLKTKRVRGAGTTAIADAEWRQKVTVEGKIRTVQLGAAAGRSLEVQIFDETGGMRLLFMGRTQIPGVDCGAVLRVTGRVGEYRGHLAIANPKYELVSA*