ggKbase home page

SCN18_13_7_16_R2_B_scaffold_9279_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(3..1628)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3DE3D similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 548.0
  • Bit_score: 582
  • Evalue 3.20e-163
EmrB/QacA subfamily drug resistance transporter similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 472.0
  • Bit_score: 450
  • Evalue 5.40e-124
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:AEN14198.1}; TaxID=862751 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SirexAA-E / ActE).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 472.0
  • Bit_score: 450
  • Evalue 2.70e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Solirubrobacterales_68_7 → SCNpilot_BF_INOC_Solirubrobacterales_68_7 → SCNpilot_BF_INOC_Solirubrobacterales_68_7 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1626
GTGACCAATACCGACGCCAGCGCGTCCGGCGCGGCGACGAAGGCGAGGGGTGGGCACGGTGCCCGCCGCGTCGCCCACCCGGCCCTGATCCTGCTGGTCATCGCCGGCGCGCAGATGATGGTGGTGCTCGACGGCACCATCGTGAACATCGCGCTCCCGTCGATGGGCCGCTACTTCGACAAGAGCCAGACCGACATGACGTGGGCGCTCAACGCGTACACGCTCGCCTTCGGTGGCCTGCTCCTGCTCGGCGGCCGGATGGGCGACATCCTCGGCCGCCGTCGCATGTTCATCCTGGGCCTGTCGCTCTTCACCCTCGGCAGCTTTGCCGCCGGTGTCGCCGCGAGCTTCCCGCTGCTGCTCGCCGGCCGGGCAGTGCAGGGCCTCGGCGGCGCCATCGCCTCGCCGACCGCCCTCTCCCTCATCACCACCGAGTTCGAGGAGGGCAAGGAGCGCACCCGCGCCATCGCGGTCTACGCCGCCGTCTCCGGGGCCGGGGCCGCGCTCGGTCTGCTGCTCGGCGGTGTCCTCACCGAGTACCTCAGCTGGCGCTGGGTGCTCTTCGTCAACGTCCCGATCGGCGTGGTGCTGATCGGCGGCGCCTTCCTCTACCTGCACGACTCCGAGCGGCTGCGCGGGCGGTTCGACGTGCTCGGCGCGCTGCTCTCGGTCGGCGGCATGGTCTCGACGGTGTACGGCTTCATCCACGTCGCGCACAGTGGCTGGAACGACACGGAGACCTATGTCGTCTTCATCCTCGCGGTAGTGCTGCTCACGTCCTTCGTGGTGTACGAGGCGAAGATCGCTCGCGACCCGATGATGCCGATGCGGATCTTCGAGAACCGCAACCGGGCCGGGGCATACCTGGTCATGTTCGTCGTCGGCGCGGCGATGTTCGGCATGTTCTACTTCGTCACCTTCTTCGTGCAGGGCGTGCGTGACTACAGCGCGCTCAAGACCGGTGTCTCGTTCCTGCCGGTCGCGGTCATGATCGGTGTCGTGTCGCAGGTGGTGGCCCGCATCCTCGGCAAGACCGGGCCGCGACCGCTTCTCGTCACCGGCACCATCCTCATCACCGCCGCGCTGCTCTGGTTCTCCCGGGTGAACGTGGGTTCGGGTTACCCGGGCACGCTGCTGCCCGGCATGCTCGTCCTCGCCACGGCGATGGGCTTCCTGTTCGTGCCGCTCACCTCGACCGCCGTCTCCAAGGTGGCCAACACCGACGCCGGACTGGCCTCGGCTCTGCTGAACGTGGGGCAGCAGGTCGGCGGCGCACTCGGCCTCTCGGTCATGACGACGGTCTTTGGTACGGCGGGCCGCAACTACGCGAACAGCCACCAGGCCAGTCTCAAACAGGCCCTCGGCCAGGCGGTCGACGGCAACCAGGAGCTGGCCGGCAAGATCGCCGGCCGGATCCAGGCGGCCGGCAACAACGGCCTGCAGCCCGAGGACATCAAGAAGTTCGTCGACACGCTCCCGGTCGATCAGCGGGGCGCCGCGTCGAGCTTCTTCGCCGGCCCGTACAAGGACTTCACCCACCACCTGCTGGCCCATGCCTCTGGCCAGGGCTTCTTGATGGGTGCGGTCTTCGGCGTCGTCGCGATCCTCGCCGCCGTCCTCCTGGTC
PROTEIN sequence
Length: 542
VTNTDASASGAATKARGGHGARRVAHPALILLVIAGAQMMVVLDGTIVNIALPSMGRYFDKSQTDMTWALNAYTLAFGGLLLLGGRMGDILGRRRMFILGLSLFTLGSFAAGVAASFPLLLAGRAVQGLGGAIASPTALSLITTEFEEGKERTRAIAVYAAVSGAGAALGLLLGGVLTEYLSWRWVLFVNVPIGVVLIGGAFLYLHDSERLRGRFDVLGALLSVGGMVSTVYGFIHVAHSGWNDTETYVVFILAVVLLTSFVVYEAKIARDPMMPMRIFENRNRAGAYLVMFVVGAAMFGMFYFVTFFVQGVRDYSALKTGVSFLPVAVMIGVVSQVVARILGKTGPRPLLVTGTILITAALLWFSRVNVGSGYPGTLLPGMLVLATAMGFLFVPLTSTAVSKVANTDAGLASALLNVGQQVGGALGLSVMTTVFGTAGRNYANSHQASLKQALGQAVDGNQELAGKIAGRIQAAGNNGLQPEDIKKFVDTLPVDQRGAASSFFAGPYKDFTHHLLAHASGQGFLMGAVFGVVAILAAVLLV