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SCN18_13_7_16_R2_B_scaffold_14311_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 3..584

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4CDD2 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 165.0
  • Bit_score: 152
  • Evalue 3.90e-34
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 156.0
  • Bit_score: 149
  • Evalue 5.40e-34
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB31906.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 156.0
  • Bit_score: 149
  • Evalue 2.70e-33

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 582
GTAGCCAAACTACACAGTTTGACTGTCTATTGCAACGAGACTCAACGCTGCGGGTGTTTGCTGCGTCTGGGGGGTGTGATGACGTTGACCCCGGCGGACGAGTTCACCGCCTACGTCGCGGCGCAGCAGACCGCGCTGCTGCGGTTCGCCGTCGTGCTCTGCGGGGACCGGCACCTGGCCGAGGAGCTGGTGGCCGACGTCCTGGTCAAGGTGTACGAGCGGTGGCCGTCCGTCGCCGCGGCCGACCACCGGCACGCCTACGTGCGGCGCATGCTCGCGAACCACTACGTCTCGTGGCAGCGCAAGTGGGGGCGGCTGCGGCCGGAGGCCGACGTCGCCGTCGACCTGCCGGTCCCCGACCGCTCGCACGAGCACGCCGAGCGCGACGCCCTCGTCACCGGTCTGCGGCGGCTGCCCCGTCAGCAGCGGGCCGTCATAGTCCTGCACTTCTACGAGGGGCTCGCCGCCGAGGAGATCGCCGAGGTGCTCGGCTGCCGGCCCGGCACCGTGCGCAGTCACCTGTCCCGCGGGCTGGCCTCGCTGCGAATCGACTACGTCCGACAGGAGTCGACCGATGCCTGA
PROTEIN sequence
Length: 194
VAKLHSLTVYCNETQRCGCLLRLGGVMTLTPADEFTAYVAAQQTALLRFAVVLCGDRHLAEELVADVLVKVYERWPSVAAADHRHAYVRRMLANHYVSWQRKWGRLRPEADVAVDLPVPDRSHEHAERDALVTGLRRLPRQQRAVIVLHFYEGLAAEEIAEVLGCRPGTVRSHLSRGLASLRIDYVRQESTDA*