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SCN18_13_7_16_R2_B_scaffold_12480_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(50..934)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B51FC9 similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 293.0
  • Bit_score: 258
  • Evalue 5.80e-66
LysR family transcriptional regulator {ECO:0000313|EMBL:EWT01928.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 293.0
  • Bit_score: 249
  • Evalue 5.00e-63
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 292.0
  • Bit_score: 225
  • Evalue 1.50e-56

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Taxonomy

SCNPILOT_EXPT_1000_BF_Microbacterium_69_10 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGAGCTCCGAGCCGTCCGCTACTTCGTCGCCATCGCCGAATCCGGCAGCGTGACCGGCGCGGCGGCCACCGTCCGGGTCGCCCAGCCCTCGCTCTCCCGCCAACTGCGCGGCCTGGAGCGCGAGCTCGGCGCCGAACTCTTCGAGCGGGGCGCCGGGCGGCTGCGTCTGTCGGCCGCCGGCAGTGCCCTGCTGCCGCTCGCGCGCGACCTGCTCGCCCGCGCCGACGGACTCTCGTCGACGGCGCAGACCCTCGCGGCCGGCCGGCTGCGCACGCTGCGCATCGCCGCGCCGCCCACCACCGTCTCCGACGTCGTCGCGCCGTTCGTCGCGACCTTCGACCAGGGCGATCCGCTCCCCTCGGTGACCGCCATCCCGACGGCCGACGTCTACACCGGCCTGCGCGACGGCTCGGTCGACCTCGCCCTCTCGGCCCGAGCCCCCGAGCCCGACCTGGGGCAGCGACTCGTCGCGCACTTCCCGATCTGGCTCTACGTCGCTCCGGACGATCGCCGCGCACGGCGGCGGGTCCGCATCGGCATCGCCGACCTGGACGCCGAGCGCCTCCTCGTCCTGCCGACCGGCTTCGTCCAGCGGGAGCTCTTCGAGGCCGCGGCGGCGCGGGCCCAACTCCCCCTCGACGGGGCGCGCGAGGTCAGCTCACCAGACGTCGCCCAGGCGCTGTGCGCGGCCGGCTGGGGCGACGCCGTGGTCTCCGACGACAGCCGCTTCGGCCTGCGGGGGCTGCGCATCGCCACGCCGGACGGCGACCTCACCATGCCCGTCTACGCCGCCTGGACGCAGCGCCACGTCGCCGCGGCACACGTCGTCGAGGTCGTCGAACGGCTCACCGCCTTCTGCGCCGCCCGCTACGACCAGGCCTGA
PROTEIN sequence
Length: 295
MELRAVRYFVAIAESGSVTGAAATVRVAQPSLSRQLRGLERELGAELFERGAGRLRLSAAGSALLPLARDLLARADGLSSTAQTLAAGRLRTLRIAAPPTTVSDVVAPFVATFDQGDPLPSVTAIPTADVYTGLRDGSVDLALSARAPEPDLGQRLVAHFPIWLYVAPDDRRARRRVRIGIADLDAERLLVLPTGFVQRELFEAAAARAQLPLDGAREVSSPDVAQALCAAGWGDAVVSDDSRFGLRGLRIATPDGDLTMPVYAAWTQRHVAAAHVVEVVERLTAFCAARYDQA*