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SCN18_13_7_16_R2_B_scaffold_15917_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(3..149)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000366022B similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 44.0
  • Bit_score: 73
  • Evalue 5.80e-11
putative RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 46.0
  • Bit_score: 71
  • Evalue 4.80e-11
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW99748.1}; RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:CCB71211.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 46.0
  • Bit_score: 71
  • Evalue 2.40e-10

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 147
GTGGGACCTCTGACCGAGCCGGACACCGCCGACCGGCTGCGCGAACTGGCGCCGCTGGTGCTCGGCGTCCTCGCCCGCCGCCACGGCGACTTCGCCGACTGCGAGGACGCGGTCCAGGAGGCGCTGCTGGCCGCGGCGACGCAGTGG
PROTEIN sequence
Length: 49
VGPLTEPDTADRLRELAPLVLGVLARRHGDFADCEDAVQEALLAAATQW