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SCN18_13_7_16_R2_B_scaffold_17013_2

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 1331..1543

Top 3 Functional Annotations

Value Algorithm Source
Putative type IV pilus biogenesis protein PilC n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GZD7_ACTM4 similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 64.0
  • Bit_score: 78
  • Evalue 2.00e-12
Pilus assembly protein PilC {ECO:0000313|EMBL:KHD78886.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 64.0
  • Bit_score: 79
  • Evalue 2.10e-12
pilC; putative type IV pilus biogenesis protein PilC similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 64.0
  • Bit_score: 78
  • Evalue 5.60e-13

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGAGCACGCCGACGCTGCCGAAGACCTTCTCCTACGAGGCGCTCGACGCCCAGGGCAAGCGCACCAAGGGCAAGATCGAGGCCAGCACCGACAGCGCGGCCGCGGCGACGCTGCGGCAGCAGGGCGTCACCCCGCTCTCGCTCACCGAGGCCGGCAAGGGGCTGCAGAAGGAGCTCCAGATCCCGGGACTCTCCGGCCGGGTGACGCTGAAG
PROTEIN sequence
Length: 71
MSTPTLPKTFSYEALDAQGKRTKGKIEASTDSAAAATLRQQGVTPLSLTEAGKGLQKELQIPGLSGRVTLK