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SCN18_13_7_16_R2_B_scaffold_13600_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 3..533

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J540_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 176.0
  • Bit_score: 259
  • Evalue 2.00e-66
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 176.0
  • Bit_score: 259
  • Evalue 5.80e-67
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADP79491.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 176.0
  • Bit_score: 259
  • Evalue 2.90e-66

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 531
GGCCTGGACGCGCCGGAGCTGGCGAGCGTGCGGTCGGCGCTGCAGTTGGTCCTCACCGGACACCAGCCCTACCCGGCCGTCGTCATCAACCGCTGGTGGGAACTGCTCGACGCCAACCCCGCCGTGGGCGTCCTCACCACCGGCTGCGCGGCCGAGCTACTGAGCCCACCGGTGAACGTGCTACGACTGAGCCTGCACCCGGACGGCATGGCACCACGCATCGCCAACCTGGCGCAGTGGCGCGGACACCTGCTGTCGCAGGTCCGACGCCGAGCCGAACAGACCGGCGACGCCCGGCTGCACGAGCTGTACGGGGAGCTGCGCGGCTACCCCGGGGGCGCCGAGGCCCCGCGCGCCGACGTGAGCGTCGTGCTGCCGCTGCGGCTTCGCCACGACCGCGGCGACCTCTCCTTCTTCTCGGTGGCCGCGAGCGTCGAGACCGCGGCCGACGTCACCGTCGAGGAGCTGGTGGTCGAGTCGTTCTACCCGGCCGACACGGCGACGGCCGAGTACCTGCGCATGCTCGCCTGA
PROTEIN sequence
Length: 177
GLDAPELASVRSALQLVLTGHQPYPAVVINRWWELLDANPAVGVLTTGCAAELLSPPVNVLRLSLHPDGMAPRIANLAQWRGHLLSQVRRRAEQTGDARLHELYGELRGYPGGAEAPRADVSVVLPLRLRHDRGDLSFFSVAASVETAADVTVEELVVESFYPADTATAEYLRMLA*