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SCN18_13_7_16_R2_B_scaffold_15198_3

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(1321..1671)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=3 Tax=Amycolatopsis mediterranei RepID=D8HIE6_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 114.0
  • Bit_score: 150
  • Evalue 6.70e-34
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 114.0
  • Bit_score: 150
  • Evalue 1.90e-34
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:AEK46863.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 114.0
  • Bit_score: 150
  • Evalue 9.50e-34

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 351
CAGTTGTCTGATCCAGCCTCTGCGGGCGGCTACCTCCGGACATCGGTCATCAACGGCGCACGGTCATCGCATCGCCGCGCCGGCGTTGTTCGCAGGCACCTCCGCGTCGCCGAACCAGACGACTCACCGGCGGCTGATTCAGCCGTGCTACTCGCGGAGGAACATCGGCAAGTGATCGGCGCCGTTCAGAGGCTCTCACCACGACAACGAGAAGTTCTCGTACTGCGTTATTGGGCCCACATGAGCGAAGCGGAGATCGCAGCGACGCTTCACATCTCACCCGGCACCGTGAAATCGACGGCATCCCGCGCCCTGACTGCTCTGGCCGACCATCTAGGAGTGCCAAAATGA
PROTEIN sequence
Length: 117
QLSDPASAGGYLRTSVINGARSSHRRAGVVRRHLRVAEPDDSPAADSAVLLAEEHRQVIGAVQRLSPRQREVLVLRYWAHMSEAEIAATLHISPGTVKSTASRALTALADHLGVPK*