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SCN18_13_7_16_R2_B_scaffold_15265_2

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(944..1333)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 128.0
  • Bit_score: 130
  • Evalue 1.10e-27
Ribonuclease VapC n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDD2_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 128.0
  • Bit_score: 130
  • Evalue 8.00e-28
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 128.0
  • Bit_score: 130
  • Evalue 2.30e-28

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Taxonomy

SCNpilot_BF_INOC_Solirubrobacterales_68_7 → SCNpilot_BF_INOC_Solirubrobacterales_68_7 → SCNpilot_BF_INOC_Solirubrobacterales_68_7 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 390
GTGCTCATTGACACCTCGGCCTGGGTCGAGTTCCTGCGACGCACGGGATCACCGACCGCTCACGCTGTCGCCGCGGCCGTGCGGGGACAGGCCGCGACGACCGACGTGATCGTCATGGAGGTCCTGGCCGGGACCACCGATCCGGATCGGCTCAGCTCGTGGGAACGGGCCATGGACGGCGTCGACTACGTCGCCCAGCTTCCCCGCGACGACGCCGAGGCGGCGGCCGCGATCTATCGGGCCTGCCGACGGGGCGGTGAGTCACCGCGGCAGATCACCGACTGTCTGATAGCGGCGGTCGCGATCCGCTGTGCCCTTCCGGTGCTGCACCATGATCGCGACTTCGAGGTCATCGCGCGGCACACGGTGCTGGAGACGGTGACCGCATGA
PROTEIN sequence
Length: 130
VLIDTSAWVEFLRRTGSPTAHAVAAAVRGQAATTDVIVMEVLAGTTDPDRLSSWERAMDGVDYVAQLPRDDAEAAAAIYRACRRGGESPRQITDCLIAAVAIRCALPVLHHDRDFEVIARHTVLETVTA*