ggKbase home page

SCN18_13_7_16_R2_B_scaffold_16516_3

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 780..1058

Top 3 Functional Annotations

Value Algorithm Source
transglycosylase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7A8DF similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 91.0
  • Bit_score: 148
  • Evalue 2.00e-33
Transglycosylase associated protein {ECO:0000313|EMBL:EJZ08513.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 90.0
  • Bit_score: 143
  • Evalue 1.20e-31
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 91.0
  • Bit_score: 135
  • Evalue 5.00e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGCTCGGTCTGATCGTCAGTCTGCTCGTCATCGGTCTGATCGCCGGTGCTCTGGCCCGGTTGATCGTGCCGGGGCGGCAGGAGATGTCCATCCCGATGACCGCCCTGATCGGGATCATCGGATCCTTCGTCGGGGGGTTCCTCGGCTACCTGATCTTCCACAAGGACCACCAGGACGGCTTCTTCCAGCCGTCCGGGATCATCGGCTCGGTGATCGGGGCCGTGATCGTCCTGCTCGTCTGGGTCCGGGTCGGCGGTCGCTCCCGGATCCGGGGCTGA
PROTEIN sequence
Length: 93
MLGLIVSLLVIGLIAGALARLIVPGRQEMSIPMTALIGIIGSFVGGFLGYLIFHKDHQDGFFQPSGIIGSVIGAVIVLLVWVRVGGRSRIRG*