ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCN18_13_7_16_R2_B_scaffold_20679_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 1..1053

Top 3 Functional Annotations

Value Algorithm Source
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 356.0
  • Bit_score: 448
  • Evalue 8.60e-123
valS; valyl-tRNA synthetase (EC:6.1.1.9) similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 358.0
  • Bit_score: 441
  • Evalue 1.30e-121
Valine--tRNA ligase n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S397_ACTS5 similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 358.0
  • Bit_score: 441
  • Evalue 4.40e-121

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
CTGCACGGCCTGGTGCGTGACGCCTCCGGGAAGAAGATGTCCAAGTCGCGCGGCAACGTCGTCGACCCGCTGCTGTGGATCGACGAGTACGGCGCGGACGCGGTGCGCCTGTCGCTGCTGCAGGGCGCCAACCCCGGCGCCGACCAGGCGATCAACGAGGAGTGGGTGAAGGGCACCCGCAACTTCGGCACCAAGCTCTGGAACGCCACCCGGTTCGCGCTGATGTCCGGCGCCACGGTCGAGGGGCCGCTGCCGGCCGAGGTCACCGGTCCGGATGCCTGGATCCTCGCCCGGCTGCACGAGGTGATCACCGAGGTCGACGCGCTCTACGAGCGGTACGAGTTCGCCAAGATCGTCGACGTCCTCTACCACTTCGCCTGGGACGAGGACTGCGACTGGTACATCGAGCTGGCCAAGCTCTCCCTCAACGAGCCGAACGCGGCCGGCACGCGGCGGGTGCTCGGCGAGGTCCTCGACACGCTGCTGCGGCTGCTGCACCCGATGATCCCGTTCGTCACCGAGGAGCTGTGGACGGCGCTCACGGGCCGCGAGTCGGTCGTCGTCGCGTCGTGGCCGGTGGCCGATCCGACGCGCGCCGACGCCGGCGCCGCCGCCGACGTCGAGCTGATCCAGACTGTCGTCACCGAGGTGCGGCGGTTCCGCTCCGAGCAGGGGGTGAAGCCGTCGGCCAAGGTACCGGCGCGGCTCGCCGGCGCGACGCCGAGCACCGAGCCGGCGATCCGGTCCCTGCTGCGGTTGGACTCGGTCGGCGACGGCTTCACGGCCACGGCCGCGCTGACCACCGCGGCCGGCGTCCGGGTCGAGCTGGACCTCTCCGGCACGATCGACGTCGCGGCCGAGCGGGCCCGGCTGGCGAAGGACCGGGCGGTGGCCGAGAAGGAGCGGGCCACCAACGCGGCCAAGCTCGGCAACGAAGCCTTCATCGGCAAGGCCCCCGACGCGGTGGTCGCCAAGGTCCGCGAGCGGCTCGCAACGGCCGAGGCCGAGCTGGCCCGCATCGACGAGGCGCTGAAGAACCTGCCGGAGTCGTAG
PROTEIN sequence
Length: 351
LHGLVRDASGKKMSKSRGNVVDPLLWIDEYGADAVRLSLLQGANPGADQAINEEWVKGTRNFGTKLWNATRFALMSGATVEGPLPAEVTGPDAWILARLHEVITEVDALYERYEFAKIVDVLYHFAWDEDCDWYIELAKLSLNEPNAAGTRRVLGEVLDTLLRLLHPMIPFVTEELWTALTGRESVVVASWPVADPTRADAGAAADVELIQTVVTEVRRFRSEQGVKPSAKVPARLAGATPSTEPAIRSLLRLDSVGDGFTATAALTTAAGVRVELDLSGTIDVAAERARLAKDRAVAEKERATNAAKLGNEAFIGKAPDAVVAKVRERLATAEAELARIDEALKNLPES*