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SCN18_13_7_16_R2_B_scaffold_21071_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(3..1319)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4C1D4 similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 427.0
  • Bit_score: 436
  • Evalue 3.00e-119
Major Facilitator Superfamily arabinose transporter similarity KEGG
DB: KEGG
  • Identity: 50.1
  • Coverage: 429.0
  • Bit_score: 396
  • Evalue 5.80e-108
Major Facilitator Superfamily arabinose transporter {ECO:0000313|EMBL:CCH89883.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.1
  • Coverage: 429.0
  • Bit_score: 396
  • Evalue 2.90e-107

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
CGCGGAGCGGACGGTATTGATTTTGTAGGACGTCTGAACACGGAGCATGCTGACCGGGTGGCGGTCGACGAGCGGGCTCCGGGCTCGATCTTCGGTCCGGCGTTGCGGGCCACCAGCACCGGCCTGGTCATCCTCATCACGCTGATCGCCTTCGAGGCGATGGCGGTCGCGGCCGCCCTGCCGACCGCCGCCCGCGCCGTGCACGGCCTCGCCGCCTACGGCTGGGCGTTCACCGGCTTCCTCATCGCCGACGTCGTCGGCATGGTCGCCTCCGGCCAGCTCAGCGACAGCCGAGGCCCGCGCCTGCCACTGCTGGTCGGGCTCACCGGCTTCGTCGTCGGCCTGGTGCTCGCCGGCACGGCCACCACGATGGTCCAGCTGGTGGCCGGACGGGTCGTCCAGGGGTTCAGCGGCGGGCTGATGATCACCGCCGTCTACGTCGTCATCGGCCAGGCCTATCCAGAGCGGCTGCGGCCCTCGCTGTTCGCGGTGACGTCGTCGGCGTGGGTCGTCCCGTCGCTGGTCGGGCCGGTGGTCTCCGGTGCCCTGGCCCAGCACGCGAGCTGGCGCTGGGTCTTCCTCGGCCTCGTACCCTTTGCCTTCGTCGGAGGTCTGCTGCTCCTCCCGGTGCTGCGGTCACTGCACGCGCCGGCCGAACCGGGACGCCTCGCGAGCCCGGCCCGCCTGGTCCGCGCGGTGGCGGTCGCCGCGGGCATCGCGGCCATGGAGGAGGCGGGCCAGCATCCGTCGCCGCTGGCGATCGGGGGCGCCGTCGTCGGCCTCGCCGCGATGATCTGGGGGCTGCACGCGCTGCTGCCGGTGGGGACGTTCCGCGTCCGCCCCGGCGTCTCGGCGCCGATCGCGATGCGCGGCCTGGTGTCCGGCGCGTTCTTCGGCGTCGAGTCGGCCGTCCCGCTCAGCCTGAGCGTGCAGCACGGCTACGGCGCGACGATGGCCGGCCTGCCGCTCGCCGCCTCGGGCATGAGCTGGGCCGTGGGCTCGTGGTGGCAGGGGCGGGCCGACGACGCCGCCGGCCCGCACGTGCGCATCCGGTTGATCCGGATCGGCTTCCTGCTCGTCGCGATCGCCGCCGGCGGGATAGCGCTGTCGGCGTTCCCGGGCGTGCCCGGCTGGCTCGCCTACCCGGCCTGGCTGGTGAGCGGCGTCGGGGCGGGCCTGACCGTCTCGAGCGTCAGCGTGCTGATGCTGAACTTCACCAACGACGCCGACCGCGGAGCCGACTCGGCCGCCCTGCAACTCTCCGACGCGACGGCGAGCGCGCTGACCACCGGACTGGCCGGTCTGCTCGTCGCCGCC
PROTEIN sequence
Length: 439
RGADGIDFVGRLNTEHADRVAVDERAPGSIFGPALRATSTGLVILITLIAFEAMAVAAALPTAARAVHGLAAYGWAFTGFLIADVVGMVASGQLSDSRGPRLPLLVGLTGFVVGLVLAGTATTMVQLVAGRVVQGFSGGLMITAVYVVIGQAYPERLRPSLFAVTSSAWVVPSLVGPVVSGALAQHASWRWVFLGLVPFAFVGGLLLLPVLRSLHAPAEPGRLASPARLVRAVAVAAGIAAMEEAGQHPSPLAIGGAVVGLAAMIWGLHALLPVGTFRVRPGVSAPIAMRGLVSGAFFGVESAVPLSLSVQHGYGATMAGLPLAASGMSWAVGSWWQGRADDAAGPHVRIRLIRIGFLLVAIAAGGIALSAFPGVPGWLAYPAWLVSGVGAGLTVSSVSVLMLNFTNDADRGADSAALQLSDATASALTTGLAGLLVAA