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SCN18_13_7_16_R2_B_scaffold_23105_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(1..366)

Top 3 Functional Annotations

Value Algorithm Source
helix-turn-helix domain-containing protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF40C similarity UNIREF
DB: UNIREF100
  • Identity: 36.0
  • Coverage: 125.0
  • Bit_score: 69
  • Evalue 1.60e-09
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63475.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 124.0
  • Bit_score: 77
  • Evalue 8.20e-12
transcriptional regulator, XRE family similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 53.0
  • Bit_score: 52
  • Evalue 5.70e-05

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 366
GTGACGAGCGAGCCCCTGATCCGACCCGGCAGCTGGGTACGTACAGCCCGCCGCCAGCGGCGGCTGAGCCAGCGTGAACTGGCCGAGCGTAGTGGCGTGCCGCCGTCGACCATTGCGCGGATCGAGTCCGGAGCCAACTGTCCCAGGCTCGACACCTTCGCGCAGCTGATGGCCGCGAGCGGGTTCAAGTTGGCCATAGTCGACGGCCGGCACGAGCCGATGTACGTCGATGAGGAACTCGAGGAACTGCGCGACTGCGCGGATCGGCACTTCTCGGTGCATCTTGAGGTCGAGCCGACGCCGGGTTACTACGACTGGCACAACCCGCGAACGTGGTGGGGCTGGCATCGGATCGCTTGGCCCGGG
PROTEIN sequence
Length: 122
VTSEPLIRPGSWVRTARRQRRLSQRELAERSGVPPSTIARIESGANCPRLDTFAQLMAASGFKLAIVDGRHEPMYVDEELEELRDCADRHFSVHLEVEPTPGYYDWHNPRTWWGWHRIAWPG