ggKbase home page

SCN18_13_7_16_R2_B_scaffold_19733_2

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(79..630)

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate 3,4-dioxygenase, alpha subunit {ECO:0000313|EMBL:ELQ89900.1}; EC=1.13.11.3 {ECO:0000313|EMBL:ELQ89900.1};; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 180.0
  • Bit_score: 242
  • Evalue 3.80e-61
protocatechuate 3,4-dioxygenase alpha chain (EC:1.13.11.3) similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 180.0
  • Bit_score: 238
  • Evalue 8.40e-61
Protocatechuate 3,4-dioxygenase, alpha subunit n=1 Tax=Frankia sp. CN3 RepID=G6HAV1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 181.0
  • Bit_score: 244
  • Evalue 7.10e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGACCACCCCGGGCCAGACCGTCGGGCCGTTCTTCGGCTACGCGCTCCCCTACCCCGACGACGGGCAGCTCGTCCCGGCGGCCCACCCCGGGGCGGTGCTGCTCACCGGGCGGGTGCTCGACGGCGCGGGCGATCCCGTCCCCGATGCACTGCTGGAGATCTGGCAGCCCGACCCTTCCGGGACGATCCCGCAGCTGGCGGGCTCGCTGCGCCGTGACGGGTCGTCGTTCACCGGGTGGGGACGCGCCGCGACGGACGGGGCCGGCCGGTACGCGTTCACCACCCTGTCCCCCGGCCCCCTCGCCCCGGGGCGGGCACCGTTCTTCGCGATGACCGTCCTGGCCCGTGGTCTGCTGCACCGGCTGTTCACCCGCGCCTACCTCCCCGTCGACGACGTGGCCCTGACCGGCGATCCGCTGCTGTCGTCGCTACCGCTCGAGCGTCGTCGGACCCTGCTCGCGGTCGAGCGCGACGGCACGCTGCACTTCGACGTCCGCCTGCAGGGCGCCGACGAGACCGTGTTCCTGCGCTATCCCGGCGAGCCGGTGTGA
PROTEIN sequence
Length: 184
MTTPGQTVGPFFGYALPYPDDGQLVPAAHPGAVLLTGRVLDGAGDPVPDALLEIWQPDPSGTIPQLAGSLRRDGSSFTGWGRAATDGAGRYAFTTLSPGPLAPGRAPFFAMTVLARGLLHRLFTRAYLPVDDVALTGDPLLSSLPLERRRTLLAVERDGTLHFDVRLQGADETVFLRYPGEPV*