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SCN18_13_7_16_R2_B_scaffold_19950_3

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(1104..1373)

Top 3 Functional Annotations

Value Algorithm Source
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Rathayibacter toxicus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 87.0
  • Bit_score: 137
  • Evalue 8.30e-30
GDP-mannose 4,6-dehydratase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPE3_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 80.0
  • Bit_score: 132
  • Evalue 1.10e-28
GDP-mannose 4,6-dehydratase similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 87.0
  • Bit_score: 137
  • Evalue 1.70e-30

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Taxonomy

SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 270
GGCGACGACTTCGTGGTGGCGACCGGCGAGACCCACTCGATCCGCGAGTTCCTCGACCTGGCCTTCGGCCACGTCAACATCGACGACTGGGCGCCCTACGTCAAGCAGGACCCGCGCTTCCTGCGCCCGGCTGAGGTCGACCTGCTCATCGGCGACCCGTCCAAGGCGCGCGAGAAGCTCGGCTGGACGCCCAAGGTCAGCTTCCCGGAGCTGGTTTCGATGATGGTCGAGTCCGACCTCGATCAGCAGCGGGCCAACGTCGCGAAGTAA
PROTEIN sequence
Length: 90
GDDFVVATGETHSIREFLDLAFGHVNIDDWAPYVKQDPRFLRPAEVDLLIGDPSKAREKLGWTPKVSFPELVSMMVESDLDQQRANVAK*