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SCN18_13_7_16_R2_B_scaffold_20381_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(1..1350)

Top 3 Functional Annotations

Value Algorithm Source
Putative two-component sensor n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RGJ8_FRAAA similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 436.0
  • Bit_score: 264
  • Evalue 1.20e-67
Histidine kinase,GAF domain-containing protein {ECO:0000313|EMBL:KJE23486.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 436.0
  • Bit_score: 266
  • Evalue 4.60e-68
two-component sensor similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 436.0
  • Bit_score: 264
  • Evalue 3.50e-68

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
CGCGTAAACGCGTGTCGCACCGGGTGCGGCCTGGGGTCGGGGGACCAGATGGCACAGGGGACGCGGCCTGCCCGCGCATCGGACGAGCTGGAGCAGTGGCAGAGCCTGCTCCGCGTCAGCACTGACGATCACTCGGCCGACACACTCGTCGAGACGCTGCACCGCGTCGTCGACACCGCGCGCGACCTGCTCGGCTGCCGCTACGCGGTGCTGGGCGTCGTCGACGACACCGGGGCGCTGGAGCACCTCGTGCCGGCCGGCGCCGACCCGCGCAAGATCAAGCCGATCGGCCGCCGGCCGCTGCGCGACGGCGTACTGGGCGCGGTGATCGTCGACTCCCGCACCATTCGCCTGCCCGGGCCCGACGTCGACGCCCGCTCCATCGGGTTGCCGGCCGGGCACCCGGTCGCGAGTTCGCTGCTCGGCGTGCCGATCCGCAGCGAGGGTCGGACGGTGGGGGCGCTCTACCTCTCCCAGCCCGAGGGCGACCGGCCGTTCACCGCCGCCGACGAGGATGCCGCCGCCCTGGTCGCGGCCGCCGCGGCGACGGCGATCCGGCGTGCCCGCGAGGCCGAGCAGCAGGCGCACCGCCGGCGCTGGGCGGCCGAGGCCGCCCAGCTGACCCGCCGGCTGCTCGCCGAGGTCCACGACGAGCCGCTGCGACTCGTGGTCGAGCGGGTGCATGAGGTGGCCGGTGCCGACCTCGTCACCGTCATCGGCCGGCGCGACGAGGACGGCTACGACATCCGCGACGCGGCCGGCCCGGCCGCCCGCTCCGTGCGCGGGCAGGTCGTGGAGAGCACGCGCAGCGTGGCCGCGGAGGTGATGCGGGACGCGACGCCGCGCCTGTACCCCGATCTCGTCACTCACTTCCCGGGCTCGGTCGTCGTCGAGCGGATGCCCTTCGACACCGCGCTGGTGGTGCCGTTCAACGGTCCGGAGCTCGGGCGCGGGGCGCTGGTCCTGCTGCGCGGCGCGGGGCGTCCGGTCTTCACCCACGCCGAGCTGGAGGCGATCACCGACTTCGCCGCGCAGATCGCCGTCGCCCTGGAGCTCGTCCGGACCCGTGACCGCCGCAGCGAGGTGGCCGTCCACGACGAGCGCGACCGCATCGCCCGCGACCTGCACGACCACGTGATCCAGCGGCTCTTCGCGATCGGCCTCGCGGTGCAGAGTGTCGGCGCGGGTCTGGACGGTGAGGCCGGACGGCGACTGCTCGCCGGCGTCGACGACATCGACACGACGATCGCGCAGATCCGCTCCACGATCTACCAGCTGACCGGACCGGTGCTCGCCGCCCAGGACTCGCTGCGTGAGCAGGTGGTGCAGCTGATGGCGGAGATGGAGCCG
PROTEIN sequence
Length: 450
RVNACRTGCGLGSGDQMAQGTRPARASDELEQWQSLLRVSTDDHSADTLVETLHRVVDTARDLLGCRYAVLGVVDDTGALEHLVPAGADPRKIKPIGRRPLRDGVLGAVIVDSRTIRLPGPDVDARSIGLPAGHPVASSLLGVPIRSEGRTVGALYLSQPEGDRPFTAADEDAAALVAAAAATAIRRAREAEQQAHRRRWAAEAAQLTRRLLAEVHDEPLRLVVERVHEVAGADLVTVIGRRDEDGYDIRDAAGPAARSVRGQVVESTRSVAAEVMRDATPRLYPDLVTHFPGSVVVERMPFDTALVVPFNGPELGRGALVLLRGAGRPVFTHAELEAITDFAAQIAVALELVRTRDRRSEVAVHDERDRIARDLHDHVIQRLFAIGLAVQSVGAGLDGEAGRRLLAGVDDIDTTIAQIRSTIYQLTGPVLAAQDSLREQVVQLMAEMEP