ggKbase home page

SCN18_13_7_16_R2_B_scaffold_22654_2

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(242..1246)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ETF1_MODMB similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 334.0
  • Bit_score: 476
  • Evalue 1.50e-131
Pilus assembly protein CpaF {ECO:0000313|EMBL:KGH45497.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 334.0
  • Bit_score: 482
  • Evalue 3.90e-133
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 334.0
  • Bit_score: 476
  • Evalue 4.40e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
GAGGATCCGACGATCGAGGAGATCTGGATCAACGAGCCGTCCCGGGTCTTCGTCGCCCGCAACGGCCGCCCCGAACTCACCAACCTCATCCTGACCGCCGACCAGGTGGCCGAGCTCGTCGAGCGGATGCTGCGTCCGACCGGTCGCCGGCTGGATCTCTCGACTCCGTTCGTCGACGCCACACTCCCCGGCGGCGAACGGGTGCACGTCGTCACTGGGAGCATCACCGGCCGGCACCTGGCGGTGAACATCCGCAAGTTCGCGGTAGGCCTGCGCTCCCTCGACGAGCTCGTCGTCATCGGGACGCTCACCGCGGCCGCGGCCCGCTTCCTCGAGGCCTCCGTCGTCGCCGGCCTCAACATCCTCGTGGCCGGCGGGACGCAGACGGGGAAGACGACGCTGCTCAACAGCCTCTGTGCGGCGATCCCGGCGCGCGACCGGGTCGTGACCGTCGAGGAGGTCTTCGAGCTCTCGCCCGGATCGCCCGATGTCGTCGCGATGCAGACCCGCCCGGCGAACCTCGACGGCGCGGGGGAGATCCCGCTGCGGCGGCTGGTCAAGGAGGCGCTGCGGATGCGCCCGTCCCGGCTGATCGTCGGCGAGGTCCGGCAGGAGGAGTGCCTGGACCTGCTGATCGCGCTCAACTCCGGCCTGCCCGGCATGTGCACGCTGCACGCGAACTCGGCCCGTGAGGCGCTGACCAAGATGTGCACGCTCCCGCTGCTCGCCGGCGAGAACGTCTCGGCCGCCTTCGTCGTCCCGACCGTCGCCGCGAGCGTGGACGTGGTCGTGCACCTCGGCCTCGAAGCCTCCGGCGCCCGCCGGGTCCGCGAGATCCTCGGCGTCTCCGGCCGGGTCGAGGGCGCGGTCGTCGAGGTCAGCGAGCTCTTCGCCTCACGCTCGGGGCGCCTCGAACGCGGTGACGGCTTCCCGCCGCACCCCGAGCGGTACGAGTCGGCCGGCCTCGACCTGGTCCAGCTCTTGACCCGGCGCGGGGACCGCTGA
PROTEIN sequence
Length: 335
EDPTIEEIWINEPSRVFVARNGRPELTNLILTADQVAELVERMLRPTGRRLDLSTPFVDATLPGGERVHVVTGSITGRHLAVNIRKFAVGLRSLDELVVIGTLTAAAARFLEASVVAGLNILVAGGTQTGKTTLLNSLCAAIPARDRVVTVEEVFELSPGSPDVVAMQTRPANLDGAGEIPLRRLVKEALRMRPSRLIVGEVRQEECLDLLIALNSGLPGMCTLHANSAREALTKMCTLPLLAGENVSAAFVVPTVAASVDVVVHLGLEASGARRVREILGVSGRVEGAVVEVSELFASRSGRLERGDGFPPHPERYESAGLDLVQLLTRRGDR*