ggKbase home page

SCN18_13_7_16_R2_B_scaffold_24021_3

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 758..1186

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding LysM n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8P6_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 37.8
  • Coverage: 135.0
  • Bit_score: 97
  • Evalue 6.40e-18
peptidoglycan-binding LysM similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 135.0
  • Bit_score: 97
  • Evalue 1.80e-18
Peptidoglycan-binding LysM {ECO:0000313|EMBL:ACV79101.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 135.0
  • Bit_score: 97
  • Evalue 9.00e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGCGGAATCTGACGGCGAAACTGCGGGCGTTGGCCGCCCTGATCGTGCTGCTCACGCTTGTCGTCGGTATCCCGTTCGGACTGGCCGGGCTGATCGGCAACCCAATGCACGGCTGGGCCGATCTGAAGGTCGGCGACCTGACCAACGAAGTGATCATCGACCTGCTGGCCGCCGTGGTGTGGCTGGCCTGGGCGCAGTTCGCCCTGTCGGTCGTCGTGGAGTTCGGGGCCGCCACCCGGCACGTACAGCGCCCGACACGCATCCCGCTGGTTCCCCGCGCATCGCAGAACCTGGCGCACAGCCTGATCGGCGCCGTGCTGCTGATCGGCACCGCGACGGTAGCGCTAGCCACCCCAGTCCACGCCTTGGCCGCGACCCCGCACCGGGCACCGATGGTCAGCGCGAGCGTCCAGGCCCGCACTCTCGCG
PROTEIN sequence
Length: 143
MRNLTAKLRALAALIVLLTLVVGIPFGLAGLIGNPMHGWADLKVGDLTNEVIIDLLAAVVWLAWAQFALSVVVEFGAATRHVQRPTRIPLVPRASQNLAHSLIGAVLLIGTATVALATPVHALAATPHRAPMVSASVQARTLA